Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_K08
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical ...    43   2e-04
AF003386-5|AAK82898.1|  529|Caenorhabditis elegans Hypothetical ...    43   2e-04
AF003386-2|AAB54255.1|  527|Caenorhabditis elegans Hypothetical ...    43   2e-04
AF003386-1|AAK82899.1|  529|Caenorhabditis elegans Hypothetical ...    43   2e-04
Z75543-5|CAA99872.2|  270|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AC024207-2|AAL77193.1|  425|Caenorhabditis elegans Hypothetical ...    30   1.2  
AC024207-1|AAL77194.1|  428|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z50858-4|CAA90724.2|  156|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z74031-12|CAE54902.1|  460|Caenorhabditis elegans Hypothetical p...    28   4.7  
Z74031-11|CAD54138.1|  474|Caenorhabditis elegans Hypothetical p...    28   4.7  
AL023844-11|CAA19525.3|  489|Caenorhabditis elegans Hypothetical...    27   8.2  

>AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical
           protein F59E12.4a protein.
          Length = 527

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = +3

Query: 516 PLXPWDEXYLKEHNIKHMSFHSYLPKIT-SKNFGVT 620
           P+ P+DE YLKE +IKHMSFH+++ K+  S+  G T
Sbjct: 46  PVDPFDEEYLKEKDIKHMSFHAHVRKLLGSQGKGTT 81


>AF003386-5|AAK82898.1|  529|Caenorhabditis elegans Hypothetical
           protein F59E12.4b protein.
          Length = 529

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = +3

Query: 516 PLXPWDEXYLKEHNIKHMSFHSYLPKIT-SKNFGVT 620
           P+ P+DE YLKE +IKHMSFH+++ K+  S+  G T
Sbjct: 46  PVDPFDEEYLKEKDIKHMSFHAHVRKLLGSQGKGTT 81


>AF003386-2|AAB54255.1|  527|Caenorhabditis elegans Hypothetical
           protein F59E12.5a protein.
          Length = 527

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = +3

Query: 516 PLXPWDEXYLKEHNIKHMSFHSYLPKIT-SKNFGVT 620
           P+ P+DE YLKE +IKHMSFH+++ K+  S+  G T
Sbjct: 46  PVDPFDEEYLKEKDIKHMSFHAHVRKLLGSQGKGTT 81


>AF003386-1|AAK82899.1|  529|Caenorhabditis elegans Hypothetical
           protein F59E12.5b protein.
          Length = 529

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = +3

Query: 516 PLXPWDEXYLKEHNIKHMSFHSYLPKIT-SKNFGVT 620
           P+ P+DE YLKE +IKHMSFH+++ K+  S+  G T
Sbjct: 46  PVDPFDEEYLKEKDIKHMSFHAHVRKLLGSQGKGTT 81


>Z75543-5|CAA99872.2|  270|Caenorhabditis elegans Hypothetical
           protein K01D12.5 protein.
          Length = 270

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 293 RPTGNPSVKV-PDXFSHQSQVLPRLKSHYQYPPHL 394
           RP   P ++  P   +   QVLP  +++YQYP +L
Sbjct: 53  RPYNQPQLQQKPSVLTQSYQVLPESRNYYQYPQYL 87


>AC024207-2|AAL77193.1|  425|Caenorhabditis elegans Hypothetical
           protein Y74E4A.1a protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 55  TARVEVLDSDVTAHLFXRIYEALNLNSFAFTLHKDRQRKEEITSSKSRQLR 207
           T  V+VLD  +T      +++ +N+N F     KDR+ +      K+  LR
Sbjct: 79  TLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTEVLR 129


>AC024207-1|AAL77194.1|  428|Caenorhabditis elegans Hypothetical
           protein Y74E4A.1b protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 55  TARVEVLDSDVTAHLFXRIYEALNLNSFAFTLHKDRQRKEEITSSKSRQLR 207
           T  V+VLD  +T      +++ +N+N F     KDR+ +      K+  LR
Sbjct: 79  TLEVQVLDGSITEMWMNEVFKEMNINGFLKLSWKDRRLRWNPEEWKTEVLR 129


>Z50858-4|CAA90724.2|  156|Caenorhabditis elegans Hypothetical
           protein F44A6.4 protein.
          Length = 156

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +1

Query: 7   MSXSQKMLLRVQS--PEGTARVEVLDSDVTAHLFXRIYEALNLNSFAFTLHKDRQRKEEI 180
           M  + K ++R+Q    +G  +    +  VTAHL+   Y  L    FA     ++QRKE  
Sbjct: 42  MLTTLKFVIRLQQGHAQGNLKPNCFNDTVTAHLYTFPYNILTNCIFACEDFINKQRKESA 101

Query: 181 TSSKSRQ 201
            + K  Q
Sbjct: 102 ENLKRSQ 108


>Z74031-12|CAE54902.1|  460|Caenorhabditis elegans Hypothetical
           protein F32D8.12b protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 275 SLPQAQRPTGNPSVKVPDXFSHQSQVLPRLKSHYQYPPHLLVLQ 406
           SLP  Q+  GN SV+  +    Q     R +SH+  PP  +VL+
Sbjct: 17  SLPDLQKIVGNSSVRTQESVRRQ---FARDESHFIAPPPAVVLE 57


>Z74031-11|CAD54138.1|  474|Caenorhabditis elegans Hypothetical
           protein F32D8.12a protein.
          Length = 474

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 275 SLPQAQRPTGNPSVKVPDXFSHQSQVLPRLKSHYQYPPHLLVLQ 406
           SLP  Q+  GN SV+  +    Q     R +SH+  PP  +VL+
Sbjct: 17  SLPDLQKIVGNSSVRTQESVRRQ---FARDESHFIAPPPAVVLE 57


>AL023844-11|CAA19525.3|  489|Caenorhabditis elegans Hypothetical
           protein Y48A6B.10 protein.
          Length = 489

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +2

Query: 284 QAQRPTGNPSVKVPDXFSHQSQVLPRLKSHYQYPPHLLVLQRXMKYICNCT 436
           Q   P G     VP  +  QS+  PR +   Q PP  ++LQ   +   N T
Sbjct: 273 QCLTPNGRLLPAVPRKYPSQSEPPPRSRPAPQKPPITIMLQSNSRLTANNT 323


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,416,273
Number of Sequences: 27780
Number of extensions: 256049
Number of successful extensions: 665
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)