Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_K08
         (621 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          23   1.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.7  

>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -3

Query: 610 KFLDVIFGKYEWNDMCLML 554
           +F D+ FG  +W+ +C+++
Sbjct: 42  QFTDITFGVNKWSKVCIVV 60


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 273 TVFHKLRDPPETP 311
           T+ HK+R PP TP
Sbjct: 458 TLKHKIRVPPGTP 470


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/44 (29%), Positives = 16/44 (36%)
 Frame = +2

Query: 248 QSMVLYSLNSLPQAQRPTGNPSVKVPDXFSHQSQVLPRLKSHYQ 379
           Q M LY L     AQ P     V         +   PR K H++
Sbjct: 404 QEMALYYLKPSYDAQEPAWKTHVWKKGRDKKSTSKKPRRKFHFK 447


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +1

Query: 64  VEVLDSDVTAHLFXRIYEALNLNSFAFTLHKDRQRKEEI 180
           +E+  + +    F RIY+ +     ++ +H+    K+EI
Sbjct: 406 LEIFSTSMKDPAFYRIYKRIIDYYHSYKMHQKPYNKDEI 444


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +1

Query: 64  VEVLDSDVTAHLFXRIYEALNLNSFAFTLHKDRQRKEEI 180
           +E+  + +    F RIY+ +     ++ +H+    K+EI
Sbjct: 406 LEIFSTSMKDPAFYRIYKRIIDYYHSYKMHQKPYNKDEI 444


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,863
Number of Sequences: 438
Number of extensions: 2888
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)