Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_K01
(606 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0131 + 27898028-27898042,27898159-27898274,27898361-278984... 142 2e-34
01_06_0730 - 31552747-31553088,31553583-31553646,31553743-315538... 140 8e-34
01_06_0180 - 27260099-27260440,27261236-27261350,27261403-272615... 123 1e-28
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 29 2.9
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 28 5.0
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 28 6.6
02_04_0185 - 20748206-20748405,20749067-20749232,20749373-207494... 28 6.6
11_06_0007 - 19171122-19172036 27 8.7
04_03_0615 + 18048787-18048865,18048897-18049753 27 8.7
>05_07_0131 +
27898028-27898042,27898159-27898274,27898361-27898424,
27899450-27899791
Length = 178
Score = 142 bits (344), Expect = 2e-34
Identities = 65/153 (42%), Positives = 91/153 (59%)
Frame = +1
Query: 40 QLREYEVIGRKLPSENEPKPPLL*NENFLSGXQLSPNLAFWYFLRQLKKFKKTTGEIVXX 219
+ +Y+V+GR LP+ + P + + ++ FWYFLR+LKK KK+ G+++
Sbjct: 5 RFHQYQVVGRALPTPGDEHPKIY-RMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAI 63
Query: 220 XXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGARHRARAHSI 399
N+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R I
Sbjct: 64 NEIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCI 123
Query: 400 QIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKR 498
QIIK + C+R KQFHNS I+FPL R
Sbjct: 124 QIIKTATVHFKLCKRDNTKQFHNSNIKFPLVYR 156
>01_06_0730 -
31552747-31553088,31553583-31553646,31553743-31553858,
31553964-31553978
Length = 178
Score = 140 bits (339), Expect = 8e-34
Identities = 65/153 (42%), Positives = 90/153 (58%)
Frame = +1
Query: 40 QLREYEVIGRKLPSENEPKPPLL*NENFLSGXQLSPNLAFWYFLRQLKKFKKTTGEIVXX 219
+ +Y+V+GR LP+ + P + + ++ FWYFLR+LKK KK+ G+I+
Sbjct: 5 RFHQYQVVGRGLPTPTDEHPKIY-RMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAI 63
Query: 220 XXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYXDMGARHRARAHSI 399
N+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R I
Sbjct: 64 NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCI 123
Query: 400 QIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKR 498
QIIK + C+R KQFH S I+FPL R
Sbjct: 124 QIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYR 156
>01_06_0180 -
27260099-27260440,27261236-27261350,27261403-27261518,
27261594-27261608
Length = 195
Score = 123 bits (296), Expect = 1e-28
Identities = 68/169 (40%), Positives = 92/169 (54%), Gaps = 16/169 (9%)
Frame = +1
Query: 40 QLREYEVIGRKLPSENEPKPPL------L*NENFLSGXQLSPNL---AFW-------YFL 171
+ +Y+V+GR LP+ + P + NE S L A W YFL
Sbjct: 5 RFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFCSSYLVRFADWGACPVCRYFL 64
Query: 172 RQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQ 351
R+LKK KK+ G+++ N+GIWLRY+SR+G HNMY+EYRD ++ GAV Q
Sbjct: 65 RKLKKVKKSNGQMLAINEIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQ 124
Query: 352 CYXDMGARHRARAHSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKR 498
Y +M +RHR R IQIIK + C+R KQFHN +I+FPL R
Sbjct: 125 MYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHNGSIKFPLVYR 173
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +3
Query: 396 NTDHQSGSNQXCC----VSPSTGQTVPQQHHQIPIAQTCAP 506
N H G N+ P+ QT P+QH Q+PI T P
Sbjct: 406 NNHHHQGGNRGGAHHVGTPPNQQQTKPEQHPQLPIGATKQP 446
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 381 SPSSLNTDHQSGSNQXCCVSPSTGQTVPQQHH 476
S + L T ++G+N C STGQT P Q H
Sbjct: 561 SATKLATKCENGANVSCDGVGSTGQTPPLQQH 592
>12_02_0133 - 14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 378 QSPSSLNTDHQSGSNQXCCVSPSTGQTVPQQHHQIPI 488
Q P S T++Q SN + Q + HHQ+PI
Sbjct: 950 QCPQSTETNYQRCSNGETESNQPVSQNELEDHHQVPI 986
>02_04_0185 -
20748206-20748405,20749067-20749232,20749373-20749471,
20749487-20749561,20749663-20749743,20750121-20750274,
20750330-20750425,20750518-20750727,20750746-20750957
Length = 430
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 463 HNSTIRFPLPKRVHHYXRLNTFAY 534
H+ +R PLP +HH TFAY
Sbjct: 221 HDPEVRDPLPLTIHHLPIAVTFAY 244
>11_06_0007 - 19171122-19172036
Length = 304
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 464 WNCLTCGRRHAAALITSTLMICI 396
W C CG R AA L+ +C+
Sbjct: 252 WGCKACGEREAAVLLLPCRHLCL 274
>04_03_0615 + 18048787-18048865,18048897-18049753
Length = 311
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 167 KYQKARFGDNWXPERKFSFYSKGGLGSF 84
+Y +FG W RKF F ++ G SF
Sbjct: 177 QYHFLKFGSGWMKLRKFEFENEQGFWSF 204
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,415,280
Number of Sequences: 37544
Number of extensions: 293739
Number of successful extensions: 765
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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