Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_J24
         (328 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      24   0.47 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   1.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   2.5  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   2.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   4.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   4.3  

>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 23.8 bits (49), Expect = 0.47
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 23  QHLVGXTVFGVAHIFASFNDTFVHVTDLSGRETI 124
           +H+VG  V  V  ++ SFN T  +V D   RE I
Sbjct: 21  EHMVGTIVVVVRGVWVSFNQTAQNV-DTFVREQI 53


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 223 NSWHNGLAHKAPCYWWKQN 279
           N WHN   + +  +W K N
Sbjct: 374 NRWHNNNGNNSNNHWRKNN 392


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 81  SLNEAKMCATPNTVXPTK 28
           ++NE + C+TP    PTK
Sbjct: 427 NVNENQDCSTPTENSPTK 444


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 121 YRPCHWWHEXE 153
           +RP +WWHE E
Sbjct: 91  HRP-NWWHELE 100


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 15  SGPSI*WAXQCLV*HTFSLHSMTHSFML 98
           S P+I W  QC+  + F  ++   +++L
Sbjct: 194 SHPNITWYQQCVTYNVFPTYAHELTYLL 221


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 15  SGPSI*WAXQCLV*HTFSLHSMTHSFML 98
           S P+I W  QC+  + F  ++   +++L
Sbjct: 194 SHPNITWYQQCVTYNVFPTYAHELTYLL 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,779
Number of Sequences: 336
Number of extensions: 1548
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)