Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_J19
(606 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY017378-1|AAG54076.1| 1025|Homo sapiens RNA helicase-DEAD box p... 36 0.11
BX649449-3|CAH71689.1| 476|Homo sapiens PRAME family member 5 p... 35 0.19
BC130276-1|AAI30277.1| 476|Homo sapiens PRAME family member 5 p... 35 0.19
BC130274-1|AAI30275.1| 476|Homo sapiens PRAME family member 5 p... 35 0.19
BC101344-1|AAI01345.1| 476|Homo sapiens PRAME family member 5 p... 35 0.19
BC101342-1|AAI01343.1| 476|Homo sapiens PRAME family member 6 p... 35 0.19
AL358783-3|CAH73924.1| 476|Homo sapiens PRAME family member 6 p... 35 0.19
BC111750-1|AAI11751.1| 1025|Homo sapiens interferon induced with... 35 0.26
BC078180-1|AAH78180.1| 772|Homo sapiens IFIH1 protein protein. 35 0.26
AF095844-1|AAG34368.1| 1025|Homo sapiens melanoma differentiatio... 35 0.26
AC007750-3|AAY24206.1| 589|Homo sapiens unknown protein. 35 0.26
AK056293-1|BAB71141.1| 468|Homo sapiens protein ( Homo sapiens ... 32 1.8
Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding p... 31 4.2
AK074499-1|BAC11024.1| 636|Homo sapiens protein ( Homo sapiens ... 31 4.2
AF054502-1|AAC39882.1| 669|Homo sapiens latent transforming gro... 31 4.2
AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming gro... 31 4.2
AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming gro... 31 4.2
>AY017378-1|AAG54076.1| 1025|Homo sapiens RNA helicase-DEAD box
protein RH116 protein.
Length = 1025
Score = 35.9 bits (79), Expect = 0.11
Identities = 28/98 (28%), Positives = 45/98 (45%)
Frame = +3
Query: 243 PNSFKILFTIT*YSYYCSINHIPAAS**TSQIHQMKVPAVKKAXNXRSAREAIHMVHLQL 422
P K+L +T YC ++ P + T Q + KKA + +E++ HL+
Sbjct: 549 PFKEKLLEIMTRIQTYCQMS--PMSDFGTQPYEQWAIQMEKKAAKEGNRKESVCAEHLRK 606
Query: 423 HHMDLQYNQXMNLIQQMNIIQTTVQNEXKPKXKIAQIE 536
++ LQ N + +I ++ T NE K K K A IE
Sbjct: 607 YNKALQINDTIRMIDAYTHLE-TFYNEEKDK-KFAVIE 642
>BX649449-3|CAH71689.1| 476|Homo sapiens PRAME family member 5
protein.
Length = 476
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 256 LKELGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH--I 83
++ L L L+ M + Y K +++ Q TTQ L LC L + +S+ FL + +
Sbjct: 231 MRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQLL 289
Query: 82 SCL 74
SCL
Sbjct: 290 SCL 292
>BC130276-1|AAI30277.1| 476|Homo sapiens PRAME family member 5
protein.
Length = 476
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 256 LKELGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH--I 83
++ L L L+ M + Y K +++ Q TTQ L LC L + +S+ FL + +
Sbjct: 231 MRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQLL 289
Query: 82 SCL 74
SCL
Sbjct: 290 SCL 292
>BC130274-1|AAI30275.1| 476|Homo sapiens PRAME family member 5
protein.
Length = 476
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 256 LKELGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH--I 83
++ L L L+ M + Y K +++ Q TTQ L LC L + +S+ FL + +
Sbjct: 231 MRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQLL 289
Query: 82 SCL 74
SCL
Sbjct: 290 SCL 292
>BC101344-1|AAI01345.1| 476|Homo sapiens PRAME family member 5
protein.
Length = 476
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 256 LKELGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH--I 83
++ L L L+ M + Y K +++ Q TTQ L LC L + +S+ FL + +
Sbjct: 231 MRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQLL 289
Query: 82 SCL 74
SCL
Sbjct: 290 SCL 292
>BC101342-1|AAI01343.1| 476|Homo sapiens PRAME family member 6
protein.
Length = 476
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 256 LKELGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH--I 83
++ L L L+ M + Y K +++ Q TTQ L LC L + +S+ FL + +
Sbjct: 231 MRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQLL 289
Query: 82 SCL 74
SCL
Sbjct: 290 SCL 292
>AL358783-3|CAH73924.1| 476|Homo sapiens PRAME family member 6
protein.
Length = 476
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -3
Query: 256 LKELGSLYLNFMSFTTYHKHRSVKSKVIFQITTQILTLCYLNFIGQSSLHFLNSYFH--I 83
++ L L L+ M + Y K +++ Q TTQ L LC L + +S+ FL + +
Sbjct: 231 MRNLQKLVLSHMDVSRYVSPEQ-KKEIVTQFTTQFLKLCCLQKLSMNSVSFLEGHLDQLL 289
Query: 82 SCL 74
SCL
Sbjct: 290 SCL 292
>BC111750-1|AAI11751.1| 1025|Homo sapiens interferon induced with
helicase C domain 1 protein.
Length = 1025
Score = 34.7 bits (76), Expect = 0.26
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = +3
Query: 243 PNSFKILFTIT*YSYYCSINHIPAAS**TSQIHQMKVPAVKKAXNXRSAREAIHMVHLQL 422
P K+L +T YC ++ P + T Q + KKA + +E + HL+
Sbjct: 549 PFKEKLLEIMTRIQTYCQMS--PMSDFGTQPYEQWAIQMEKKAAKEGNRKERVCAEHLRK 606
Query: 423 HHMDLQYNQXMNLIQQMNIIQTTVQNEXKPKXKIAQIE 536
++ LQ N + +I ++ T NE K K K A IE
Sbjct: 607 YNEALQINDTIRMIDAYTHLE-TFYNEEKDK-KFAVIE 642
>BC078180-1|AAH78180.1| 772|Homo sapiens IFIH1 protein protein.
Length = 772
Score = 34.7 bits (76), Expect = 0.26
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = +3
Query: 243 PNSFKILFTIT*YSYYCSINHIPAAS**TSQIHQMKVPAVKKAXNXRSAREAIHMVHLQL 422
P K+L +T YC ++ P + T Q + KKA + +E + HL+
Sbjct: 549 PFKEKLLEIMTRIQTYCQMS--PMSDFGTQPYEQWAIQMEKKAAKEGNRKERVCAEHLRK 606
Query: 423 HHMDLQYNQXMNLIQQMNIIQTTVQNEXKPKXKIAQIE 536
++ LQ N + +I ++ T NE K K K A IE
Sbjct: 607 YNEALQINDTIRMIDAYTHLE-TFYNEEKDK-KFAVIE 642
>AF095844-1|AAG34368.1| 1025|Homo sapiens melanoma differentiation
associated protein-5 protein.
Length = 1025
Score = 34.7 bits (76), Expect = 0.26
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = +3
Query: 243 PNSFKILFTIT*YSYYCSINHIPAAS**TSQIHQMKVPAVKKAXNXRSAREAIHMVHLQL 422
P K+L +T YC ++ P + T Q + KKA + +E + HL+
Sbjct: 549 PFKEKLLEIMTRIQTYCQMS--PMSDFGTQPYEQWAIQMEKKAAKKGNRKERVCAEHLRK 606
Query: 423 HHMDLQYNQXMNLIQQMNIIQTTVQNEXKPKXKIAQIE 536
++ LQ N + +I ++ T NE K K K A IE
Sbjct: 607 YNEALQINDTIRMIDAYTHLE-TFYNEEKDK-KFAVIE 642
>AC007750-3|AAY24206.1| 589|Homo sapiens unknown protein.
Length = 589
Score = 34.7 bits (76), Expect = 0.26
Identities = 28/98 (28%), Positives = 44/98 (44%)
Frame = +3
Query: 243 PNSFKILFTIT*YSYYCSINHIPAAS**TSQIHQMKVPAVKKAXNXRSAREAIHMVHLQL 422
P K+L +T YC ++ P + T Q + KKA + +E + HL+
Sbjct: 113 PFKEKLLEIMTRIQTYCQMS--PMSDFGTQPYEQWAIQMEKKAAKEGNRKERVCAEHLRK 170
Query: 423 HHMDLQYNQXMNLIQQMNIIQTTVQNEXKPKXKIAQIE 536
++ LQ N + +I ++ T NE K K K A IE
Sbjct: 171 YNEALQINDTIRMIDAYTHLE-TFYNEEKDK-KFAVIE 206
>AK056293-1|BAB71141.1| 468|Homo sapiens protein ( Homo sapiens
cDNA FLJ31731 fis, clone NT2RI2006855, weakly similar to
Homo sapiens RNA helicase (RIG-I) mRNA. ).
Length = 468
Score = 31.9 bits (69), Expect = 1.8
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +3
Query: 288 YCSINHIPAAS**TSQIHQMKVPAVKKAXNXRSAREAIHMVHLQLHHMDLQYNQXMNLIQ 467
YC ++ P + T Q + KKA + +E + HL+ ++ LQ N + +I
Sbjct: 7 YCQMS--PMSDFGTQPYEQWAIQMEKKAAKEGNRKERVCAEHLRKYNEALQINDTIRMID 64
Query: 468 QMNIIQTTVQNEXKPKXKIAQIE 536
++ T NE K K K A IE
Sbjct: 65 AYTHLE-TFYNEEKDK-KFAVIE 85
>Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding
protein-4 protein.
Length = 1587
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = -1
Query: 513 SVFXRFVLWFE*YSFAVSGSXSDCIADPCDVVEDAPYVLLLEHFXGFXL-SSLLEPSSDV 337
++ R V W E G S C C E A Y L H G+ S L DV
Sbjct: 1158 NILARNVTWQECCCTVGEGWGSGCRIQQCPGTETAEYQSLCPHGRGYLAPSGDLSLRRDV 1217
Query: 336 SERFIMTPQVC--GLCCSS 286
E + QVC G+C ++
Sbjct: 1218 DECQLFRDQVCKSGVCVNT 1236
>AK074499-1|BAC11024.1| 636|Homo sapiens protein ( Homo sapiens
cDNA FLJ90018 fis, clone HEMBA1000732, highly similar to
Homo sapiens mRNA for latent transforming growth
factor-beta ).
Length = 636
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = -1
Query: 513 SVFXRFVLWFE*YSFAVSGSXSDCIADPCDVVEDAPYVLLLEHFXGFXL-SSLLEPSSDV 337
++ R V W E G S C C E A Y L H G+ S L DV
Sbjct: 207 NILARNVTWQECCCTVGEGWGSGCRIQQCPGTETAEYQSLCPHGRGYLAPSGDLSLRRDV 266
Query: 336 SERFIMTPQVC--GLCCSS 286
E + QVC G+C ++
Sbjct: 267 DECQLFRDQVCKSGVCVNT 285
>AF054502-1|AAC39882.1| 669|Homo sapiens latent transforming growth
factor-beta binding protein 4 protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = -1
Query: 513 SVFXRFVLWFE*YSFAVSGSXSDCIADPCDVVEDAPYVLLLEHFXGFXL-SSLLEPSSDV 337
++ R V W E G S C C E A Y L H G+ S L DV
Sbjct: 332 NILARNVTWQECCCTVGEGWGSGCRIQQCPGTETAEYQSLCPHGRGYLAPSGDLSLRRDV 391
Query: 336 SERFIMTPQVC--GLCCSS 286
E + QVC G+C ++
Sbjct: 392 DECQLFRDQVCKSGVCVNT 410
>AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming growth
factor-beta binding protein 4L protein.
Length = 1624
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = -1
Query: 513 SVFXRFVLWFE*YSFAVSGSXSDCIADPCDVVEDAPYVLLLEHFXGFXL-SSLLEPSSDV 337
++ R V W E G S C C E A Y L H G+ S L DV
Sbjct: 1195 NILARNVTWQECCCTVGEGWGSGCRIQQCPGTETAEYQSLCPHGRGYLAPSGDLSLRRDV 1254
Query: 336 SERFIMTPQVC--GLCCSS 286
E + QVC G+C ++
Sbjct: 1255 DECQLFRDQVCKSGVCVNT 1273
>AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming growth
factor-beta binding protein 4S protein.
Length = 1557
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = -1
Query: 513 SVFXRFVLWFE*YSFAVSGSXSDCIADPCDVVEDAPYVLLLEHFXGFXL-SSLLEPSSDV 337
++ R V W E G S C C E A Y L H G+ S L DV
Sbjct: 1128 NILARNVTWQECCCTVGEGWGSGCRIQQCPGTETAEYQSLCPHGRGYLAPSGDLSLRRDV 1187
Query: 336 SERFIMTPQVC--GLCCSS 286
E + QVC G+C ++
Sbjct: 1188 DECQLFRDQVCKSGVCVNT 1206
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,924,236
Number of Sequences: 237096
Number of extensions: 1339338
Number of successful extensions: 2207
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2207
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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