Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_J11
         (651 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3F090 Cluster: Putative uncharacterized protein; n=1; ...    38   0.21 
UniRef50_A4M7W7 Cluster: Sensor protein; n=1; Petrotoga mobilis ...    34   2.6  
UniRef50_UPI00000DA87A Cluster: hypothetical protein CT1981; n=1...    33   5.9  
UniRef50_Q3ME30 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_A5Z9W8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q3F090 Cluster: Putative uncharacterized protein; n=1;
           Bacillus thuringiensis serovar israelensis ATCC
           35646|Rep: Putative uncharacterized protein - Bacillus
           thuringiensis serovar israelensis ATCC 35646
          Length = 269

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +2

Query: 419 FPHESVKITLQDESIKNKVRVIMVNFSRCTIPXNKELVKNIYLDVENN 562
           FP    K+ +QD+    KV +  VN+ + +    KEL+K  + +VEN+
Sbjct: 61  FPDYGFKLLIQDKKDPKKVEIDKVNYQKLSTEDKKELMKQTFTEVENS 108


>UniRef50_A4M7W7 Cluster: Sensor protein; n=1; Petrotoga mobilis
           SJ95|Rep: Sensor protein - Petrotoga mobilis SJ95
          Length = 918

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
 Frame = +2

Query: 434 VKITLQDESIKNKVRVIMV---NFSRCTIPXNKELVKNIYLDVENNEXLKGKKSVY 592
           ++ TL+ ++IK +   ++V   NF    IP N +L  +IY  +E N+ + G  SVY
Sbjct: 223 IENTLEGKAIKERSSYMLVGRENFQNYFIPFNIDLKSSIYSVIEQNDEVYGVLSVY 278


>UniRef50_UPI00000DA87A Cluster: hypothetical protein CT1981; n=1;
           Chlorobium tepidum TLS|Rep: hypothetical protein CT1981
           - Chlorobium tepidum TLS
          Length = 415

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 212 GSRQLVCIPHITEADLYKVTSLFVPNEKEINGKNFTPLG 328
           GS  +V +PH  E D      L + +E E  G+NF+ LG
Sbjct: 220 GSNTMVLVPHFLEQDPVGCAGLNISSEIESGGENFSDLG 258


>UniRef50_Q3ME30 Cluster: Putative uncharacterized protein; n=1;
           Anabaena variabilis ATCC 29413|Rep: Putative
           uncharacterized protein - Anabaena variabilis (strain
           ATCC 29413 / PCC 7937)
          Length = 501

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = +2

Query: 371 YVKWLEDGDFQDIDFKFPHESV---KITLQDESIKNKVRVIMVNF--SRCTIPXNKELVK 535
           Y +W  D DFQ     +PH+++   K+ +  + ++  +  I  N+  ++ +IP N  + +
Sbjct: 59  YERWNADPDFQQQFSTYPHQTITDYKLQIDHDDVQALLHQINTNYDNNKKSIPVNSNINQ 118

Query: 536 NIYLDV 553
           N Y ++
Sbjct: 119 NFYQEL 124


>UniRef50_A5Z9W8 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 460

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = +2

Query: 443 TLQDESIK-NKVRVIMVNFSRCTIPXNKELVKNIYLDVENNEXLKGKKSVYMITDV 607
           T  DES K N VR++++N +  T+  +K + K   L++   E  K KKS+    D+
Sbjct: 56  TTNDESKKDNTVRIVILNNNYITMHYSKFVAKASVLNIYFGENFKNKKSIKKQIDI 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,921,495
Number of Sequences: 1657284
Number of extensions: 8973943
Number of successful extensions: 18329
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18327
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)