Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_J10
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5634E Cluster: PREDICTED: similar to CG14215-PA...    72   1e-11
UniRef50_UPI0000E47E20 Cluster: PREDICTED: hypothetical protein,...    49   1e-04
UniRef50_Q16RF0 Cluster: Putative uncharacterized protein; n=1; ...    46   0.001
UniRef50_A5K9X9 Cluster: Putative uncharacterized protein; n=3; ...    38   0.21 
UniRef50_A7M5N3 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_Q9YVX9 Cluster: Early transcription factor 70 kDa subun...    34   3.4  
UniRef50_UPI00015B481A Cluster: PREDICTED: similar to copia-type...    33   4.5  
UniRef50_Q57ZB8 Cluster: Putative uncharacterized protein; n=2; ...    33   4.5  

>UniRef50_UPI0000D5634E Cluster: PREDICTED: similar to CG14215-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG14215-PA - Tribolium castaneum
          Length = 1906

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
 Frame = +1

Query: 238 SIIKTTNLSPAVFSFLQPKEXFEDNTP-----LGGILKDTKHGWLALGPKFCVVDLRTGL 402
           S+ K  NL  A   FL+P E  E+  P     +GG+L+   + WL+ GP    ++ + G 
Sbjct: 4   SVKKIINLPEAAIKFLEPDET-EEGLPYECKTIGGVLRGNDYVWLSNGPHLTAINTKMGC 62

Query: 403 KVAARTFGHKSKNSQISVKCVVELPRPLSENSKQLVISLQCD-DMGLICFFHINGSQILR 579
           +V A +FG   K+S   V CV  + RP +     L + + CD   G+IC F    S+I+R
Sbjct: 63  QVGAWSFGWVLKDSNTKVVCVDVIQRP-NGRLPFLAVGIDCDLSGGMICIFDFATSKIIR 121

Query: 580 CIQTEVVITQLSVCD 624
            I     IT L V D
Sbjct: 122 AIHVTDKITCLHVID 136


>UniRef50_UPI0000E47E20 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: hypothetical protein, partial -
           Strongylocentrotus purpuratus
          Length = 717

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = +1

Query: 319 LGGILKDTKHGWLALGPKFCVVDLRTGLKVAARTFGHKSKNSQISVKCVVELPRPLSENS 498
           L G  KD K GW+A      VV  RTG ++++  F   +  S  ++ CV + P      S
Sbjct: 35  LEGFSKDGKRGWVATDSTLDVVCTRTGNRLSSFNFSQVA-GSSATITCVKDYP---CHRS 90

Query: 499 KQLVISLQ-CDDMGLICFFHINGSQILRCIQTEVVITQL 612
            QL++ LQ   + G++C F  + S++L  +    V+T +
Sbjct: 91  YQLLVGLQTASEKGMVCRFRPHSSKLLTVVNFPHVVTAI 129


>UniRef50_Q16RF0 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 2221

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
 Frame = +1

Query: 319 LGGILKDTKHGWLALGPKFCVVDLRTGLKVAARTFGHKSKNSQISVKCVVELPRPLSENS 498
           +GG LK+   GW+A G  F V   ++G K+ +  F   SK     +    E+P     N 
Sbjct: 45  IGGFLKEGSLGWIARGSMFTVFSTKSGAKLLSHNFDQDSKTRNCVICSAEEMPLE-ETNC 103

Query: 499 KQLVISLQCD-DMGLICFFHINGSQIL 576
             + +++Q + D G++    + GS++L
Sbjct: 104 CVVAVAVQLENDTGIVVVLVVQGSRLL 130


>UniRef50_A5K9X9 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 444

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = +1

Query: 127 LFIQNSMYPNLI*SSDKLTKRIFVNYLKM--QKLQDSVFSIIKTTNLSPAVFSFLQPK 294
           +F+ + +YP++I   +KL K ++VNYL M   +L D +FS++ T  L+   F+FL+ K
Sbjct: 293 IFVSSIVYPHMI--PNKLGKGVYVNYLFMFLYQLSDMLFSLLVTVYLT--AFNFLKQK 346


>UniRef50_A7M5N3 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides ovatus ATCC 8483|Rep: Putative
           uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 410

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = +1

Query: 220 LQDSVFSIIKTTNLSPAVFSFLQPKEXFEDNTPLGGILKDTKHGWLALGPKFCVVDL 390
           LQD    ++ +  L+P  FS  + K  F ++  LGG+  D+K G L L    C VD+
Sbjct: 89  LQDEALEVLDSVGLTPNGFSN-EIKTNFTNSMNLGGLHSDSKSGTLHLHIDCCRVDM 144


>UniRef50_Q9YVX9 Cluster: Early transcription factor 70 kDa subunit;
           n=2; Entomopoxvirinae|Rep: Early transcription factor 70
           kDa subunit - Melanoplus sanguinipes entomopoxvirus
           (MsEPV)
          Length = 674

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 331 LKDTKHGWLALGPKFCVVDLRTGLKVAARTFGHKSKNSQISVK-CVVELPRPLSENSKQL 507
           LKD K  W    P+    +L   +  A R+F +K KN+++ V+ C+   P  LS    Q+
Sbjct: 456 LKDIKEIWFLTVPE-TKSELEQCIARAIRSFAYKDKNTRVVVRICLATTPNALSNEISQI 514

Query: 508 V 510
           +
Sbjct: 515 I 515


>UniRef50_UPI00015B481A Cluster: PREDICTED: similar to copia-type
           polyprotein, putative; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to copia-type polyprotein, putative -
           Nasonia vitripennis
          Length = 543

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
 Frame = +1

Query: 250 TTNLSPAVFSFLQPKEXFEDNTPLGGILKDTKHGWLALGPKFCVVDLRTGLKVAAR-TFG 426
           T +LSP    F+   E  ++   L  +L + +HG     P+   +D ++ +K++    F 
Sbjct: 427 TVSLSPTEAKFIAASEATKEIIWLRKLLSNIEHG--CAQPRILYIDNQSAIKLSRNPEFH 484

Query: 427 HKSKNSQISVKCVVELPRPLSENSKQLVISLQCDDM 534
            +SK+  +    + E  +    N+K +    QC DM
Sbjct: 485 RRSKHIDVRYHFICEKVKNNEVNTKYVNTHDQCADM 520


>UniRef50_Q57ZB8 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma|Rep: Putative uncharacterized protein -
           Trypanosoma brucei
          Length = 479

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 6   CRGILPKNERLSVIPNFHHLLQPSKPVLCTNQRIINL 116
           CRG+L  +ERL  + + HH L P+  +L    R + L
Sbjct: 262 CRGVLTNSERLPCVQHLHHPLDPTSLILVALDRKVVL 298


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,111,471
Number of Sequences: 1657284
Number of extensions: 12285287
Number of successful extensions: 25311
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25306
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)