Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_J10
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   6.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.9  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 505 LVISLQCDDMGLICF 549
           ++IS +CD +  ICF
Sbjct: 35  VIISPRCDKISAICF 49


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 440 FLDLCPNVLAATLRPVLRSTTQNFGPNA 357
           F+D+  ++L   L   L S+ QNF  +A
Sbjct: 10  FVDIGDSLLTLKLTHALSSSVQNFPSDA 37



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 609 LRYNNFRLYASQYLRPV 559
           L +NN    A Q+ RPV
Sbjct: 230 LSFNNITSVAKQFFRPV 246


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 370 LVPTQASHVWYLLKSHLMVYYLQI 299
           L+P +   +W +L     VY+L+I
Sbjct: 303 LIPFRVFILWIILVPEEQVYHLEI 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,244
Number of Sequences: 336
Number of extensions: 3558
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)