Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_J10
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0131 - 6919143-6920125,6920334-6920529                           29   4.3  
05_02_0128 - 6890918-6891900,6892929-6893124                           29   4.3  
05_02_0130 - 6906540-6907522,6908542-6908737                           28   5.6  
05_02_0129 - 6897189-6897448,6897581-6898063,6898409-6898604           27   9.9  

>05_02_0131 - 6919143-6920125,6920334-6920529
          Length = 392

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +1

Query: 466 VELPRPLSENSKQLVISLQCDDMGLICFFHINGSQIL 576
           ++L + L+EN++   + + C ++ LICF + + S+I+
Sbjct: 177 LQLAKELAENNRDARVLIACAELTLICFSNPDESKIV 213


>05_02_0128 - 6890918-6891900,6892929-6893124
          Length = 392

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +1

Query: 466 VELPRPLSENSKQLVISLQCDDMGLICFFHINGSQIL 576
           ++L + L+EN++   + + C ++ LICF + + S+I+
Sbjct: 177 LQLAKELAENNRDARVLIACAELTLICFSNPDESKIV 213


>05_02_0130 - 6906540-6907522,6908542-6908737
          Length = 392

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +1

Query: 466 VELPRPLSENSKQLVISLQCDDMGLICFFHINGSQIL 576
           ++L + L+EN++   + + C ++ LICF + + S+I+
Sbjct: 177 LQLAKELTENNRDARVLVACAELTLICFSNPDESKIV 213


>05_02_0129 - 6897189-6897448,6897581-6898063,6898409-6898604
          Length = 312

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = +1

Query: 466 VELPRPLSENSKQLVISLQCDDMGLICF 549
           ++L + L+EN+++  + + C ++ LICF
Sbjct: 141 LQLAKELAENNREARVPVACAELTLICF 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,676,637
Number of Sequences: 37544
Number of extensions: 324903
Number of successful extensions: 651
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)