Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_J08
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.4  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   6.0  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   6.0  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   7.9  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -1

Query: 198 WCRSLQPSLPCQL---RSPVTYSSSPSMLRP 115
           W   L+P  PCQL   +  V YSS  S   P
Sbjct: 178 WPEELEPGTPCQLTRRQGYVIYSSLGSFFIP 208


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -1

Query: 198 WCRSLQPSLPCQL---RSPVTYSSSPSMLRP 115
           W   L+P  PCQL   +  V YSS  S   P
Sbjct: 178 WPEELEPGTPCQLTRRQGYVIYSSLGSFFIP 208


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = -1

Query: 198 WCRSLQPSLPCQL---RSPVTYSSSPSMLRP 115
           W   L+P  PCQL   +  V YSS  S   P
Sbjct: 178 WPEELEPGTPCQLTRRQGYVIYSSLGSFFIP 208


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 74  QLTWLLRTFPFTHSGRSIDGDEEYVTGDL 160
           Q+TW L  F    +GR + G    V GD+
Sbjct: 452 QVTWALDGFALPTNGRFMIGQYVTVHGDV 480


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 74  QLTWLLRTFPFTHSGRSIDGDEEYVTGDL 160
           Q+TW L  F    +GR + G    V GD+
Sbjct: 452 QVTWALDGFALPTNGRFMIGQYVTVHGDV 480


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 110 HSGRSIDGDEE 142
           HS  SIDGDEE
Sbjct: 110 HSIHSIDGDEE 120


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 366 ASNIQSVQIPKGNVILVSKPSSVI 437
           ++ ++S+    GN IL +KPS V+
Sbjct: 358 SAKVRSMFNDSGNPILKAKPSEVV 381


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 252 PVSKSSRWPVDPSCQHRLWCRSLQPS 175
           P++   +W V+   + R W R  +P+
Sbjct: 28  PITGDEKWVVNNIKRKRWWSRPREPA 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,509
Number of Sequences: 438
Number of extensions: 3298
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)