Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_J05
(500 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 174 1e-42
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 152 5e-36
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 128 7e-29
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 124 9e-28
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 121 1e-26
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 115 5e-25
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 109 3e-23
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 102 5e-21
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 89 7e-17
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 80 3e-14
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 71 1e-11
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 69 6e-11
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 69 8e-11
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 54 2e-06
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 54 2e-06
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 51 2e-05
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.003
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 42 0.006
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 41 0.014
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 41 0.018
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 40 0.042
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 36 0.51
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 35 0.90
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 35 1.2
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 1.2
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 35 1.2
UniRef50_Q9YMK4 Cluster: Late expression factor 1; n=1; Lymantri... 33 2.7
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 33 3.6
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 33 3.6
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 33 4.8
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 32 6.3
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 174 bits (423), Expect = 1e-42
Identities = 83/102 (81%), Positives = 89/102 (87%)
Frame = +2
Query: 131 LTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYV 310
L F TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQE ERERRDNYV
Sbjct: 26 LDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYV 85
Query: 311 PXVSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQPATQGW 436
P VSALE DIIEVD DT +MLK+LDF+NI GLQLTQP T +
Sbjct: 86 PAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNNF 127
Score = 35.1 bits (77), Expect = 0.90
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRLTLDF
Sbjct: 5 RTKTVKKAAKVIIEKYYTRLTLDF 28
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 152 bits (368), Expect = 5e-36
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 128 bits (309), Expect = 7e-29
Identities = 60/95 (63%), Positives = 72/95 (75%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 83 FHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 142
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
SAL+ +IIEVDPDT ML + F ++ Q TQP
Sbjct: 143 GSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 124 bits (300), Expect = 9e-28
Identities = 58/98 (59%), Positives = 76/98 (77%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKLQE ERE RDNYVP
Sbjct: 29 FYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEEERENRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQPATQ 430
+S L+ + +EVDPDT +ML++LDF +++ LQ+T+P +
Sbjct: 88 ISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 121 bits (291), Expect = 1e-26
Identities = 56/95 (58%), Positives = 73/95 (76%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE ERER+DNYVP
Sbjct: 82 FCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKERERKDNYVPE 141
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
+SA + + IEVDPDT +M K+L+F +++ LQ+TQP
Sbjct: 142 ISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 115 bits (277), Expect = 5e-25
Identities = 53/95 (55%), Positives = 74/95 (77%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQ E ERR +Y+P
Sbjct: 65 FYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQ--EEERRADYIPE 122
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +I EVDP T +MLK+LD +++ LQ+TQP
Sbjct: 123 VSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 109 bits (263), Expect = 3e-23
Identities = 52/96 (54%), Positives = 71/96 (73%)
Frame = +2
Query: 131 LTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYV 310
L F TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQE ERERR ++V
Sbjct: 26 LDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFV 85
Query: 311 PXVSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQ 418
P SALE + I VD +T +ML L ++ G++ Q
Sbjct: 86 PEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYY+R+TLDF
Sbjct: 5 RTKTVKKTSRQVIEKYYSRMTLDF 28
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 102 bits (244), Expect = 5e-21
Identities = 50/95 (52%), Positives = 69/95 (72%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V + ER +++ YVP
Sbjct: 77 FHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------RGGER-KKETYVPE 129
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 130 VSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 88.6 bits (210), Expect = 7e-17
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+QE ERERR +YVP
Sbjct: 68 FHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEEERERRLDYVPE 127
Query: 317 VSALEHDIIEVDPDTXDMLK 376
S+++ D + D D ML+
Sbjct: 128 KSSVDIDNLRGDQDVKRMLE 147
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 79.8 bits (188), Expect = 3e-14
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KLQE ERERR ++ P
Sbjct: 28 FYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEEERERRMDHAPA 87
Query: 317 VSALEHDI---IEVDPDTXDMLKMLD 385
S ++ I + VD T ML+ L+
Sbjct: 88 TSDVDKVIQSGVSVDKKTMQMLQRLE 113
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 70.9 bits (166), Expect = 1e-11
Identities = 31/81 (38%), Positives = 52/81 (64%)
Frame = +2
Query: 134 TFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVP 313
TFD N + +++A++ +K L+N+IAG+ T L +++ + IK E ERER++N +P
Sbjct: 27 TFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIP 86
Query: 314 XVSALEHDIIEVDPDTXDMLK 376
S L+ D +EVD T +M+K
Sbjct: 87 KESMLDVDCVEVDDVTMEMIK 107
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 68.9 bits (161), Expect = 6e-11
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +2
Query: 212 FATHLMRRLRHSQVRGISIKLQEXERERRDNYVPXVSALEHDIIEVDPDTXDMLKMLDFN 391
F HLMRR++ VRGIS+KLQE ERERR ++VP S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 68.5 bits (160), Expect = 8e-11
Identities = 35/88 (39%), Positives = 53/88 (60%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F +K +C+EI I ++ L +KIAG+ THLM+ +R S + +S R R NYVP
Sbjct: 28 FYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVPE 86
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNIN 400
S L+ +I EVD T +MLK+ F +++
Sbjct: 87 GSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 53.6 bits (123), Expect = 2e-06
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +2
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ ++IEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 327 VSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 53.6 bits (123), Expect = 2e-06
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Frame = +2
Query: 128 HLTFD--TNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI--SIKLQEXERER 295
HLT D NK C+EIA+I +K LRNKIAG+ THL++ + + I +IK E
Sbjct: 23 HLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDINNIEI 82
Query: 296 RDNYVPXVSALEHDIIEVDPDTXDMLKMLDFNNIN 400
+ S E + VD +T M+K L F N N
Sbjct: 83 NNKESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 241
F+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 28 FETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATH 223
F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 22 FHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 42.3 bits (95), Expect = 0.006
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
FDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 28 FDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 41.1 bits (92), Expect = 0.014
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYV 310
F+ NK+ EIA IP++ LRN+IAG+ T L+RR + + R +S++ QE + Y+
Sbjct: 28 FELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQR-LSMR-QEITMTDEEEYI 83
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 40.7 bits (91), Expect = 0.018
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 259
F+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 28 FEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 39.5 bits (88), Expect = 0.042
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERER 295
F+ NKRI ++ P+K LRN+IAG+ T L+R + + I+ Q E R
Sbjct: 28 FEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHAEEFR 80
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 35.9 bits (79), Expect = 0.51
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 149 KRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLQEXERERRDNYVPXVSA 325
K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L ER +D V
Sbjct: 49 KDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSL-AAERISKDIVCQNVGF 106
Query: 326 LEHDIIEVDP 355
L+ +++ +P
Sbjct: 107 LQINMLMSEP 116
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 35.1 bits (77), Expect = 0.90
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 235
FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 28 FDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/33 (39%), Positives = 25/33 (75%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 235
F NK+I E++I+ +K L+N+IAG+ T+ +++
Sbjct: 23 FADNKKILNEVSIVRSKGLKNEIAGYITNYIKK 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFAT 220
FD NK++ EI I +K +RN++AG+ T
Sbjct: 27 FDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 34.7 bits (76), Expect = 1.2
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
F+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 28 FEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_Q9YMK4 Cluster: Late expression factor 1; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 1 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 234
Score = 33.5 bits (73), Expect = 2.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 138 KVKC*SCIVFFNNNLRRFLDGFSPGHDPWLKL--YSAAFDKNQRE 10
+V C + FF NN+ R LD + G WLKL + DK+ RE
Sbjct: 97 RVACLTFAAFFGNNVARILDSGNRGVHVWLKLDAFRLTADKSLRE 141
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 33.1 bits (72), Expect = 3.6
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
F NK E++A + TK +RN+IAG+ T M
Sbjct: 28 FTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 33.1 bits (72), Expect = 3.6
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
F+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 27 FEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 32.7 bits (71), Expect = 4.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 241
F+TNK + + I +K +RN++AG+ T + R++
Sbjct: 28 FETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 32.3 bits (70), Expect = 6.3
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATH 223
F+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 27 FELNKKLVDKYTNVESKDVRNRIAGYITH 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,619,834
Number of Sequences: 1657284
Number of extensions: 7255846
Number of successful extensions: 16958
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 16701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16953
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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