Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_J05
         (500 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   166   3e-43
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   4.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   4.4  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    23   5.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   5.8  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  166 bits (404), Expect = 3e-43
 Identities = 81/102 (79%), Positives = 88/102 (86%)
 Frame = +2

Query: 131 LTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYV 310
           + FDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGISIKLQE ERERRDNYV
Sbjct: 26  MDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEEERERRDNYV 85

Query: 311 PXVSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQPATQGW 436
           P VSALE DIIEVDP+T +MLK LDFNNI  +QLT P   G+
Sbjct: 86  PDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNPTAPGY 126



 Score = 33.1 bits (72), Expect = 0.005
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 67  RTKTVXXXXXXXXEKYYTRLTLDF 138
           RTKT+        EKYYTRLT+DF
Sbjct: 5   RTKTIKKASKVIIEKYYTRLTMDF 28


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 335 DIIEVDPDTXDMLKMLDFNNINGL 406
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 234 VSDTRKCEESLSNFRXRSVRGVTTMSXKCLLSNMTS 341
           +++TR C E++S F+    R   T+  K  + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = +2

Query: 251 VRGISI--KLQEXERERRDNYVPXV 319
           +R +SI  KLQ   ++RRD YV  V
Sbjct: 168 IRSLSICAKLQRIPKDRRDLYVQGV 192


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = -3

Query: 456 NYACHHSQPWVAGCVSC 406
           N AC+H   W    V C
Sbjct: 797 NCACYHDNSWSTNIVEC 813


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,980
Number of Sequences: 2352
Number of extensions: 7735
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)