Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_J05
(500 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 152 8e-37
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 152 8e-37
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 152 8e-37
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 152 8e-37
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 152 8e-37
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 152 8e-37
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 152 8e-37
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 152 8e-37
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 152 8e-37
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 152 8e-37
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 138 1e-32
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 152 bits (368), Expect = 8e-37
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 67 RTKTVXXXXXXXXEKYYTRLTLDF 138
RTKTV EKYYTRL DF
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 138 bits (334), Expect = 1e-32
Identities = 62/95 (65%), Positives = 78/95 (82%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNK +C+EIAIIP+K L NK AG+ THLM++++ VRGISIKLQE RERRDNYVP
Sbjct: 28 FHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQIQRGPVRGISIKLQEEVRERRDNYVPE 87
Query: 317 VSALEHDIIEVDPDTXDMLKMLDFNNINGLQLTQP 421
+SAL+ +IIEVDPDT +MLK+LDF ++ LQ+TQP
Sbjct: 88 ISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQP 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,461,494
Number of Sequences: 237096
Number of extensions: 1052279
Number of successful extensions: 2055
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2055
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -