Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_J04
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 145 3e-35
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 142 3e-34
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 139 2e-33
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 132 2e-31
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 82 3e-16
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 64 1e-10
06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64... 31 0.61
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 28 5.6
06_03_1275 + 28903961-28904123,28904225-28904322,28904406-289045... 28 5.6
01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964... 28 5.6
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 28 7.5
03_02_0519 + 9066918-9068261 28 7.5
02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732 27 9.9
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 145 bits (351), Expect = 3e-35
Identities = 62/108 (57%), Positives = 79/108 (73%)
Frame = +1
Query: 328 VVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGXTPYXIMFGPDICGPGTKKVHVIFSYK 507
V+QF+VKHEQ +DCGGGY+K+ ++ K G TPY IMFGPDICG TKKVH I +
Sbjct: 109 VLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFGPDICGYATKKVHAILTKN 168
Query: 508 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXAD 651
GKNHLIKKD+ CK D TH+YTLI++PD Y +LIDN + ++G + D
Sbjct: 169 GKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYDD 216
Score = 61.3 bits (142), Expect = 7e-10
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 13/85 (15%)
Frame = +3
Query: 111 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPXDDKGL----------- 251
+VFF+EKF DD WE WV SE G++ T+GK++ D DDKG+
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDA-DDKGMCEVTLLLCAGI 83
Query: 252 KTSEDARFYALSRKFKPFSNEGKPL 326
+TSED RFYA+S K+ FS++ K L
Sbjct: 84 QTSEDYRFYAISAKYPEFSSKDKTL 108
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 142 bits (343), Expect = 3e-34
Identities = 61/105 (58%), Positives = 78/105 (74%)
Frame = +1
Query: 328 VVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGXTPYXIMFGPDICGPGTKKVHVIFSYK 507
V+QF+VKHEQ +DCGGGY+K+ ++ K G TPY IMFGPDICG TKKVH IF+
Sbjct: 102 VLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHTIFTKN 161
Query: 508 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDL 642
KNHLIKKD+ C+ D +H+YTLI+ PD TY +LIDN + +SG +
Sbjct: 162 DKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSI 206
Score = 74.1 bits (174), Expect = 9e-14
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = +3
Query: 111 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARFYAL 284
+VFF+EKF +D WES WV SE E G++ T+GK+ DP +DKG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDP-EDKGIQTSEDYRFYAI 87
Query: 285 SRKFKPFSNEGKPL 326
S ++ FSN+ K L
Sbjct: 88 SAEYPEFSNKDKTL 101
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 139 bits (336), Expect = 2e-33
Identities = 56/108 (51%), Positives = 81/108 (75%)
Frame = +1
Query: 328 VVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGXTPYXIMFGPDICGPGTKKVHVIFSYK 507
V+Q+++K EQDI+CGGGY+K+ + K G TPY +MFGPDICG TKK+H+I SY+
Sbjct: 100 VLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDICGTQTKKLHLILSYQ 159
Query: 508 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXAD 651
G+N+ IKKD++C+ D TH+YT I++PD +Y +L+DN + ESG + D
Sbjct: 160 GQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMYTD 207
Score = 72.5 bits (170), Expect = 3e-13
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +3
Query: 111 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARFYAL 284
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 285 SRKFKPFSNEGKPL 326
S K FSN+G+ L
Sbjct: 86 SAKIPEFSNKGRTL 99
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 132 bits (320), Expect = 2e-31
Identities = 55/108 (50%), Positives = 77/108 (71%)
Frame = +1
Query: 328 VVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGXTPYXIMFGPDICGPGTKKVHVIFSYK 507
VVQ+++K EQDI+CGG Y+K+ + K G TPY MFGPDICG TKK+H+I SY+
Sbjct: 100 VVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGPDICGDQTKKLHLILSYQ 159
Query: 508 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXAD 651
G+N+ IKKD++C+ D TH YT I++PD +Y +L+DN + E G + D
Sbjct: 160 GQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFGSMYTD 207
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +3
Query: 102 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPXDDKGLKTSEDARF 275
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 276 YALSRKFKPFSNEGKPL 326
+A+S KF FSN+ + L
Sbjct: 83 FAISAKFPEFSNKNRTL 99
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 82.2 bits (194), Expect = 3e-16
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 10/118 (8%)
Frame = +1
Query: 328 VVQFTVKHEQDIDCGGGYLKVF---DCKLEXKDMHGXTPYXIMFGPDICGPGTKKVHVIF 498
V+QF V+ + ++CGG YLK D + K+ TPY IMFGPD CG T KVH I
Sbjct: 91 VLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKCG-STNKVHFIL 149
Query: 499 SYK----GK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLID-NEKVESGDLXAD 651
+K GK H +K D +H+YT I+KPDN +L+D EK ++ L AD
Sbjct: 150 KHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANFLSAD 207
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +1
Query: 508 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXAD 651
G NHLIKKD+ C+ D TH+YTLI++PD Y +LIDN + +G + D
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGD 562
>06_01_0081 +
646100-646346,646432-646848,647067-647170,648152-648352,
649088-649798,649944-650674,650942-651017,651096-651182,
651429-651517,651917-651973,652402-652510,652590-652649,
652835-652919,653178-653242,653694-653753,653869-653913,
654697-654800,654877-655099
Length = 1156
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/54 (24%), Positives = 30/54 (55%)
Frame = +1
Query: 277 MLSPVSSNRSVMRVNPWVVQFTVKHEQDIDCGGGYLKVFDCKLEXKDMHGXTPY 438
+L S++R+ + V+PW++ F + + I ++ ++ KL+ +D+ PY
Sbjct: 702 LLDTCSNDRNSVDVSPWILNFCLVKKWSIGRCNRFMHGYEDKLQIEDVCSYVPY 755
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 618 IVNEDFIGVVRFHNQSVQMCVDI 550
+V EDF+ + F +Q+V +C+D+
Sbjct: 353 LVEEDFVQIAEFLHQAVTICLDV 375
>06_03_1275 +
28903961-28904123,28904225-28904322,28904406-28904550,
28904690-28904814,28904957-28905049,28905297-28905362,
28905459-28905524,28905790-28905870,28905947-28906123,
28906212-28906287,28906394-28906521,28906639-28906950
Length = 509
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -3
Query: 147 TNHQETSPQRIHHNLSKIMPA-S*QRPVQQLSFSIHS 40
TNH E P+ H LSKI+ A S RP+ +S+ +H+
Sbjct: 41 TNHVERPPKERH--LSKIIAAASGARPLADVSYCVHA 75
>01_07_0383 -
43195095-43195322,43195408-43195638,43196134-43196454,
43196512-43196589,43196664-43197727,43197813-43198503,
43198743-43199541,43200010-43200158,43200159-43200286,
43200389-43200494,43200835-43200843,43201332-43201821,
43201896-43202554,43203759-43203851,43204044-43204196,
43205092-43205194,43205376-43205467,43206229-43206306,
43206987-43207049,43207339-43207512
Length = 1902
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Frame = -2
Query: 217 FPAVNLNFPNSFPGCSLYTQLLSHE----SSGNFSSKNTS-----QFIEDNASKLTTTST 65
F A + FP ++ C+++ + S +G + SK S QF+E SK TT
Sbjct: 370 FLAFSRRFPEAWSYCNIHKVVFSRFWHFLQNGCYGSKQASYPLLVQFLESIPSKAVTTE- 428
Query: 64 TAFIFDSQYHLRSNKRQ 14
F+FD ++L + + Q
Sbjct: 429 -QFVFDFLHNLWAGRNQ 444
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 145 ESSGNFSSKNTSQFIEDNASKLTTTSTTA 59
ES+G SSK + E++ + TTTSTTA
Sbjct: 59 ESAGVSSSKKKRRIEEESPAATTTTSTTA 87
>03_02_0519 + 9066918-9068261
Length = 447
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Frame = -1
Query: 467 PQMSGPNIXSYGVXPCMSXCSSLQSKTLRYPP----PQSMSC--SCLTVNWTTQGFTLIT 306
P + SYG PC S + + L PP P S +C S + ++ L T
Sbjct: 93 PAFNASGSSSYGAVPCPSTACEWRGRDLPVPPFCDTPPSNACRVSLSYADASSADGVLAT 152
Query: 305 ERFELTG 285
+ F LTG
Sbjct: 153 DTFLLTG 159
>02_04_0202 - 20876793-20877142,20877380-20879512,20884063-20884732
Length = 1050
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -2
Query: 331 LPKGLPSLLNGLNLRERA*NLASSEVFKPLSSXGSLKNFPAVNLNFPNSFP 179
+PK + SL+N LN+ N S E+ L + G L+NF A + N P
Sbjct: 370 IPKEISSLMN-LNILHIDQNNLSGELPLGLCAGGQLQNFTAQDNNLVGPLP 419
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,558,527
Number of Sequences: 37544
Number of extensions: 370095
Number of successful extensions: 945
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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