BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_J01
(538 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12573-1|CAA73154.1| 289|Drosophila melanogaster Jun protein. 51 9e-07
M36181-1|AAA28650.1| 289|Drosophila melanogaster protein ( D.me... 51 9e-07
AY058562-1|AAL13791.1| 289|Drosophila melanogaster LD25202p pro... 51 9e-07
AE013599-1018|AAM71059.1| 289|Drosophila melanogaster CG2275-PB... 51 9e-07
AE013599-1017|AAF58845.1| 289|Drosophila melanogaster CG2275-PA... 51 9e-07
AE014297-3561|AAF56307.1| 272|Drosophila melanogaster CG13622-P... 33 0.33
AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,... 29 3.0
BT024390-1|ABC86452.1| 145|Drosophila melanogaster IP05472p pro... 28 9.3
AE014134-29|AAF51553.1| 134|Drosophila melanogaster CG13694-PA ... 28 9.3
>Y12573-1|CAA73154.1| 289|Drosophila melanogaster Jun protein.
Length = 289
Score = 51.2 bits (117), Expect = 9e-07
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +3
Query: 138 METTFYDEQYPLSGPVENLKRPLTLDVG-RGGKRSRIAAP-VLSSPDLQMLKLGSPELEK 311
M F S P N KRP +LD+ + K RI AP V++SPDL + +P+LEK
Sbjct: 39 MSLDFQSPNLNTSTPNPN-KRPGSLDLNSKSAKNKRIFAPLVINSPDLSSKTVNTPDLEK 97
Query: 312 LIIQNGMVXXXXXXXXXXVLFPAVA--PTEEQXMYARPFVEALDKLHHGEAVTP 467
+++ N ++ +FP A T EQ + R F EAL LH P
Sbjct: 98 ILLSNNLMQTPQPGK----VFPTKAGPVTVEQLDFGRGFEEALHNLHTNSQAFP 147
>M36181-1|AAA28650.1| 289|Drosophila melanogaster protein (
D.melanogaster Djungene, complete cds. ).
Length = 289
Score = 51.2 bits (117), Expect = 9e-07
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +3
Query: 138 METTFYDEQYPLSGPVENLKRPLTLDVG-RGGKRSRIAAP-VLSSPDLQMLKLGSPELEK 311
M F S P N KRP +LD+ + K RI AP V++SPDL + +P+LEK
Sbjct: 39 MSLDFQSPNLNTSTPNPN-KRPGSLDLNSKSAKNKRIFAPLVINSPDLSSKTVNTPDLEK 97
Query: 312 LIIQNGMVXXXXXXXXXXVLFPAVA--PTEEQXMYARPFVEALDKLHHGEAVTP 467
+++ N ++ +FP A T EQ + R F EAL LH P
Sbjct: 98 ILLSNNLMQTPQPGK----VFPTKAGPVTVEQLDFGRGFEEALHNLHTNSQAFP 147
>AY058562-1|AAL13791.1| 289|Drosophila melanogaster LD25202p
protein.
Length = 289
Score = 51.2 bits (117), Expect = 9e-07
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +3
Query: 138 METTFYDEQYPLSGPVENLKRPLTLDVG-RGGKRSRIAAP-VLSSPDLQMLKLGSPELEK 311
M F S P N KRP +LD+ + K RI AP V++SPDL + +P+LEK
Sbjct: 39 MSLDFQSPNLNTSTPNPN-KRPGSLDLNSKSAKNKRIFAPLVINSPDLSSKTVNTPDLEK 97
Query: 312 LIIQNGMVXXXXXXXXXXVLFPAVA--PTEEQXMYARPFVEALDKLHHGEAVTP 467
+++ N ++ +FP A T EQ + R F EAL LH P
Sbjct: 98 ILLSNNLMQTPQPGK----VFPTKAGPVTVEQLDFGRGFEEALHNLHTNSQAFP 147
>AE013599-1018|AAM71059.1| 289|Drosophila melanogaster CG2275-PB,
isoform B protein.
Length = 289
Score = 51.2 bits (117), Expect = 9e-07
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +3
Query: 138 METTFYDEQYPLSGPVENLKRPLTLDVG-RGGKRSRIAAP-VLSSPDLQMLKLGSPELEK 311
M F S P N KRP +LD+ + K RI AP V++SPDL + +P+LEK
Sbjct: 39 MSLDFQSPNLNTSTPNPN-KRPGSLDLNSKSAKNKRIFAPLVINSPDLSSKTVNTPDLEK 97
Query: 312 LIIQNGMVXXXXXXXXXXVLFPAVA--PTEEQXMYARPFVEALDKLHHGEAVTP 467
+++ N ++ +FP A T EQ + R F EAL LH P
Sbjct: 98 ILLSNNLMQTPQPGK----VFPTKAGPVTVEQLDFGRGFEEALHNLHTNSQAFP 147
>AE013599-1017|AAF58845.1| 289|Drosophila melanogaster CG2275-PA,
isoform A protein.
Length = 289
Score = 51.2 bits (117), Expect = 9e-07
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +3
Query: 138 METTFYDEQYPLSGPVENLKRPLTLDVG-RGGKRSRIAAP-VLSSPDLQMLKLGSPELEK 311
M F S P N KRP +LD+ + K RI AP V++SPDL + +P+LEK
Sbjct: 39 MSLDFQSPNLNTSTPNPN-KRPGSLDLNSKSAKNKRIFAPLVINSPDLSSKTVNTPDLEK 97
Query: 312 LIIQNGMVXXXXXXXXXXVLFPAVA--PTEEQXMYARPFVEALDKLHHGEAVTP 467
+++ N ++ +FP A T EQ + R F EAL LH P
Sbjct: 98 ILLSNNLMQTPQPGK----VFPTKAGPVTVEQLDFGRGFEEALHNLHTNSQAFP 147
>AE014297-3561|AAF56307.1| 272|Drosophila melanogaster CG13622-PA
protein.
Length = 272
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 314 DHSERYGDNRYPYSGSACLISRSSTYG 394
+H ERY DNR Y SAC+ SR + G
Sbjct: 113 NHHERYTDNRRLYEQSACVASRQRSQG 139
>AE014297-963|AAF54394.4| 1173|Drosophila melanogaster CG9381-PC,
isoform C protein.
Length = 1173
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +2
Query: 11 TTWNATKEDVC*SXEKVINVRVVSSVIP--KRSVQTHGSEFRPQHGDHLL*RA---ISSQ 175
TT+N+T + V+NV + +IP S + S PQ H + A I+S
Sbjct: 377 TTFNSTNPTTNSNPTDVVNVNSCTDIIPYGSSSTSSSASSMLPQQQQHQINNASAPINSH 436
Query: 176 RPCGKP*KAPNLG 214
P +PNLG
Sbjct: 437 SQGQGPGNSPNLG 449
>BT024390-1|ABC86452.1| 145|Drosophila melanogaster IP05472p
protein.
Length = 145
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 12 QRGTPR--RRTCVNRXKKL*TFA**VQ*YRSVRCKHMVRNSGHSMETTFYDEQY 167
+R PR R C+ R + TFA + + VRC + +R GH + Q+
Sbjct: 88 ERSCPRYYRPVCILRNGRNMTFATLCEFHNQVRCANDLRRQGHGYVVPIFQYQH 141
>AE014134-29|AAF51553.1| 134|Drosophila melanogaster CG13694-PA
protein.
Length = 134
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 12 QRGTPR--RRTCVNRXKKL*TFA**VQ*YRSVRCKHMVRNSGHSMETTFYDEQY 167
+R PR R C+ R + TFA + + VRC + +R GH + Q+
Sbjct: 77 ERSCPRYYRPVCILRNGRNMTFATLCEFHNQVRCANDLRRQGHGYVVPIFQYQH 130
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,550,692
Number of Sequences: 53049
Number of extensions: 532776
Number of successful extensions: 1243
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -