Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_I24
         (518 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0299 - 2322204-2322734,2324089-2326164                           29   1.7  
05_06_0260 + 26736631-26736771,26736850-26736981,26737066-267372...    29   2.2  
06_03_0588 + 22567820-22570802,22570917-22571269                       28   3.9  
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456...    27   6.8  
05_04_0126 + 18252594-18256922                                         27   6.8  
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881     27   9.0  

>05_01_0299 - 2322204-2322734,2324089-2326164
          Length = 868

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = -1

Query: 395 KMRSFPSASYSAVKLMLLM----KANLKFPWSPSNLSLNSFR*LPFKPCINALVNVSFNP 228
           K RSF  ++ S++K    +     A++K P  P +LS      LP  P  +A ++ + NP
Sbjct: 404 KCRSFSDSTTSSLKASSKVGKGFSASMKGPEVPPDLSFTGAA-LPSNPSFDAKLSSNLNP 462

Query: 227 LPS 219
           LP+
Sbjct: 463 LPA 465


>05_06_0260 +
           26736631-26736771,26736850-26736981,26737066-26737248,
           26737344-26737370,26737482-26737689,26737863-26737944,
           26738097-26738205,26738324-26738443,26738567-26738884
          Length = 439

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
 Frame = -1

Query: 245 NVSFNPLP--SMLMSSRCTGSVEGTSSSGIPFVNSGRLFSICSLMHCSRFSLENSQASMY 72
           N S N +P  S   S+   G +  T  +G         F+      CS+ SLEN   +M 
Sbjct: 323 NSSSNEIPCGSKNGSAVTVGEISYTDITGTSASERAVTFACSEAAPCSKLSLENVNITMA 382

Query: 71  GGRXA 57
           GG+ A
Sbjct: 383 GGQNA 387


>06_03_0588 + 22567820-22570802,22570917-22571269
          Length = 1111

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 20/78 (25%), Positives = 34/78 (43%)
 Frame = +1

Query: 196 VHLDDINIDGNGLKLTFTKALMHGLKGSHLKEFKLKFDGDHGNFKLAFISNMSLTAEYEA 375
           V L+++N+DGN L  +  +++ H    + LK   L  +  HG   +      SL+   + 
Sbjct: 537 VQLNELNLDGNNLSGSIPESIHH---CAQLKTLNLAHNSLHGTIPVHIFKIFSLSEHLDL 593

Query: 376 DGKLLILQIKXKGDALIN 429
               L   I  +   LIN
Sbjct: 594 SHNYLSGGIPQEVGNLIN 611


>11_05_0099 -
           19044772-19044837,19044896-19045051,19045529-19045653,
           19045773-19045844,19045947-19046051,19046509-19046563,
           19047334-19047414,19047499-19047633,19048279-19048342,
           19048844-19048911,19049082-19049168,19050247-19050501,
           19050616-19050738,19050866-19051150,19051712-19051851,
           19052385-19052445,19052537-19052637,19052807-19052870,
           19053020-19053127
          Length = 716

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 49  PTNAXLPPYIEACEFSNENLEQCIKEQIEKSLPEFTKGI 165
           P+   LP +++  E++   + + +KE  EK L E  +GI
Sbjct: 208 PSAEALPVFVQPVEYAGRTVTEKLKELREKFLHEKARGI 246


>05_04_0126 + 18252594-18256922
          Length = 1442

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 16/103 (15%)
 Frame = +1

Query: 166  PELDVPSTDPVHLDD--------INIDG----NGLKLTFTKA----LMHGLKGSHLKEFK 297
            PE    S DPV L+D        ++ DG        LTF K     L + L   H  +  
Sbjct: 1177 PEAGTVSADPVILEDWTDSTDIIVHKDGATSAEKSALTFKKKEFKHLKYFLVEGHHMQTD 1236

Query: 298  LKFDGDHGNFKLAFISNMSLTAEYEADGKLLILQIKXKGDALI 426
            +KF+G     +   +SN ++ +    DG   +++I  KG+  I
Sbjct: 1237 IKFEGGAPELEKIVLSNTNIESLDGVDGLAKLMEIDLKGNKTI 1279


>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
          Length = 697

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 16/71 (22%), Positives = 35/71 (49%)
 Frame = +1

Query: 97  NENLEQCIKEQIEKSLPEFTKGIPELDVPSTDPVHLDDINIDGNGLKLTFTKALMHGLKG 276
           +E+L + +K+++ +    F K + +L+       HL +   D     +   +  +  LK 
Sbjct: 320 SESLHRKLKKELSEMKSAFVKAVKDLE-KEKKATHLLENLCDEFAFGIRNYEEEVRLLKQ 378

Query: 277 SHLKEFKLKFD 309
            H+K+++ KFD
Sbjct: 379 KHIKQYEHKFD 389


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.316    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,221,887
Number of Sequences: 37544
Number of extensions: 242909
Number of successful extensions: 639
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)