Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_I24
         (518 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025388-1|AAH25388.1|  322|Homo sapiens ring finger protein 113...    30   5.6  
BC017585-1|AAH17585.1|  322|Homo sapiens ring finger protein 113...    30   5.6  
AL136300-1|CAC42525.2|  322|Homo sapiens ring finger protein 113...    30   5.6  
AF539427-1|AAN33063.1|  322|Homo sapiens zinc finger protein ZNF...    30   5.6  

>BC025388-1|AAH25388.1|  322|Homo sapiens ring finger protein 113B
           protein.
          Length = 322

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 20  IRGSRVQHKRRRMHXYLHTLKPANSPMKTSNSASKNK 130
           +RG    H  R +H YL  LKP ++ M  S+S    K
Sbjct: 138 LRGREHDHIYRGIHSYLRYLKPKDTSMGNSSSGMARK 174


>BC017585-1|AAH17585.1|  322|Homo sapiens ring finger protein 113B
           protein.
          Length = 322

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 20  IRGSRVQHKRRRMHXYLHTLKPANSPMKTSNSASKNK 130
           +RG    H  R +H YL  LKP ++ M  S+S    K
Sbjct: 138 LRGREHDHIYRGIHSYLRYLKPKDTSMGNSSSGMARK 174


>AL136300-1|CAC42525.2|  322|Homo sapiens ring finger protein 113B
           protein.
          Length = 322

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 20  IRGSRVQHKRRRMHXYLHTLKPANSPMKTSNSASKNK 130
           +RG    H  R +H YL  LKP ++ M  S+S    K
Sbjct: 138 LRGREHDHIYRGIHSYLRYLKPKDTSMGNSSSGMARK 174


>AF539427-1|AAN33063.1|  322|Homo sapiens zinc finger protein
           ZNF183L1 protein.
          Length = 322

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 20  IRGSRVQHKRRRMHXYLHTLKPANSPMKTSNSASKNK 130
           +RG    H  R +H YL  LKP ++ M  S+S    K
Sbjct: 138 LRGREHDHIYRGIHSYLRYLKPKDTSMGNSSSGMARK 174


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,951,082
Number of Sequences: 237096
Number of extensions: 1344569
Number of successful extensions: 3180
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3180
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)