Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_I18
         (432 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.     117   2e-26
BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25 p...   117   2e-26
BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25 p...   117   2e-26
BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25 p...   117   2e-26
AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25 p...   117   2e-26
BC030524-1|AAH30524.1|  211|Homo sapiens CLDN19 protein protein.       32   0.96 
AK096063-1|BAC04691.1|  224|Homo sapiens protein ( Homo sapiens ...    32   0.96 
AF497644-1|AAQ07256.1|  211|Homo sapiens claudin-19 protein.           32   0.96 

>M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.
          Length = 125

 Score =  117 bits (281), Expect = 2e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +1

Query: 103 VRDKLNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 282
           VRDKLNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 283 VVQHHGQVIYTRATNGDDPVA 345
           V +H  QVIYTR T G D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  117 bits (281), Expect = 2e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +1

Query: 103 VRDKLNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 282
           VRDKLNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 283 VVQHHGQVIYTRATNGDDPVA 345
           V +H  QVIYTR T G D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  117 bits (281), Expect = 2e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +1

Query: 103 VRDKLNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 282
           VRDKLNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 283 VVQHHGQVIYTRATNGDDPVA 345
           V +H  QVIYTR T G D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  117 bits (281), Expect = 2e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +1

Query: 103 VRDKLNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 282
           VRDKLNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 283 VVQHHGQVIYTRATNGDDPVA 345
           V +H  QVIYTR T G D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  117 bits (281), Expect = 2e-26
 Identities = 60/81 (74%), Positives = 62/81 (76%)
 Frame = +1

Query: 103 VRDKLNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLXRXALIELREKGLIKQ 282
           VRDKLNN VLFDK TY KL KEVP YKLITPAVVSERLK+RGSL R AL EL  KGLIK 
Sbjct: 40  VRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKL 99

Query: 283 VVQHHGQVIYTRATNGDDPVA 345
           V +H  QVIYTR T G D  A
Sbjct: 100 VSKHRAQVIYTRNTKGGDAPA 120


>BC030524-1|AAH30524.1|  211|Homo sapiens CLDN19 protein protein.
          Length = 211

 Score = 31.9 bits (69), Expect = 0.96
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 102 FSFGPLLLLGFAATGSFLLSSVFFEAVWPKPXRP 1
           + FGP L +G+A+ G  +L   F     P+P RP
Sbjct: 159 YEFGPALFVGWASAGLAVLGGSFLCCTCPEPERP 192


>AK096063-1|BAC04691.1|  224|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38744 fis, clone KIDNE2012188, highly similar to
           Mus musculus claudin-19 mRNA. ).
          Length = 224

 Score = 31.9 bits (69), Expect = 0.96
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 102 FSFGPLLLLGFAATGSFLLSSVFFEAVWPKPXRP 1
           + FGP L +G+A+ G  +L   F     P+P RP
Sbjct: 159 YEFGPALFVGWASAGLAVLGGSFLCCTCPEPERP 192


>AF497644-1|AAQ07256.1|  211|Homo sapiens claudin-19 protein.
          Length = 211

 Score = 31.9 bits (69), Expect = 0.96
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 102 FSFGPLLLLGFAATGSFLLSSVFFEAVWPKPXRP 1
           + FGP L +G+A+ G  +L   F     P+P RP
Sbjct: 159 YEFGPALFVGWASAGLAVLGGSFLCCTCPEPERP 192


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,994,286
Number of Sequences: 237096
Number of extensions: 1092591
Number of successful extensions: 2352
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2352
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)