Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_I16
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.41 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.9  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 425 LLTEHVITTLGPVSWRITSSATNLFPLCDSSNI 327
           L+  +V+ TLG  S     +   L P+C+S+NI
Sbjct: 234 LIPFYVVATLGTTSSCTFDNLEELGPVCNSNNI 266


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 184 LKMSPNRSDGLLAKVD 231
           +K+ PN++DG L  +D
Sbjct: 71  IKIIPNKNDGTLTIID 86


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 607 HCFSLIYYHFQRPSVSSASQAHCQPGN 527
           +C++   Y+     +SS++ +H Q GN
Sbjct: 251 NCYNNYPYYSNMDYLSSSTMSHSQFGN 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,529
Number of Sequences: 336
Number of extensions: 2799
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)