Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_I16
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041032-1|AAH41032.1|  417|Homo sapiens prolactin regulatory el...    55   2e-07
BC016472-1|AAH16472.1|  417|Homo sapiens prolactin regulatory el...    55   2e-07
BC012890-1|AAH12890.1|  417|Homo sapiens prolactin regulatory el...    55   2e-07
BC002765-1|AAH02765.1|  417|Homo sapiens prolactin regulatory el...    55   2e-07
AK023064-1|BAB14385.1|  417|Homo sapiens NA, nuclear gene encodi...    55   2e-07
AF227166-1|AAF74572.1|  417|Homo sapiens prolactin regulatory bi...    55   2e-07
AF203687-1|AAF19192.1|  417|Homo sapiens SEC12 protein.                55   2e-07
AC013403-6|AAX93170.1|  417|Homo sapiens unknown protein.              55   2e-07
AF226684-1|AAG01692.1|  417|Homo sapiens prolactin regulatory el...    54   6e-07
BC109271-1|AAI09272.1|  462|Homo sapiens ZSCAN29 protein protein.      31   4.7  
BC017179-1|AAH17179.2|  523|Homo sapiens ZSCAN29 protein protein.      30   6.3  
AK093186-1|BAC04088.1|  732|Homo sapiens protein ( Homo sapiens ...    30   6.3  
AF525399-1|AAO14995.1|  851|Homo sapiens KOX31-like zinc finger ...    30   6.3  
BX537426-1|CAD97668.1|  355|Homo sapiens hypothetical protein pr...    30   8.3  
BC012137-1|AAH12137.2|  355|Homo sapiens syntaxin 5 protein.           30   8.3  

>BC041032-1|AAH41032.1|  417|Homo sapiens prolactin regulatory
           element binding protein.
          Length = 417

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +1

Query: 217 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETG 393
           L +  FPLY LQ   +  +++A GGGGA+ TG+ NG    +L     R  A  +  H+T 
Sbjct: 9   LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTE 68

Query: 394 PNVVMTCSVRSIQNRTYLTAGQESHCQL 477
               M  ++        L AGQ++HCQL
Sbjct: 69  TRATMNLALAG----DILAAGQDAHCQL 92


>BC016472-1|AAH16472.1|  417|Homo sapiens prolactin regulatory
           element binding protein.
          Length = 417

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +1

Query: 217 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETG 393
           L +  FPLY LQ   +  +++A GGGGA+ TG+ NG    +L     R  A  +  H+T 
Sbjct: 9   LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTE 68

Query: 394 PNVVMTCSVRSIQNRTYLTAGQESHCQL 477
               M  ++        L AGQ++HCQL
Sbjct: 69  TRATMNLALAG----DILAAGQDAHCQL 92


>BC012890-1|AAH12890.1|  417|Homo sapiens prolactin regulatory
           element binding protein.
          Length = 417

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +1

Query: 217 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETG 393
           L +  FPLY LQ   +  +++A GGGGA+ TG+ NG    +L     R  A  +  H+T 
Sbjct: 9   LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTE 68

Query: 394 PNVVMTCSVRSIQNRTYLTAGQESHCQL 477
               M  ++        L AGQ++HCQL
Sbjct: 69  TRATMNLALAG----DILAAGQDAHCQL 92


>BC002765-1|AAH02765.1|  417|Homo sapiens prolactin regulatory
           element binding protein.
          Length = 417

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +1

Query: 217 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETG 393
           L +  FPLY LQ   +  +++A GGGGA+ TG+ NG    +L     R  A  +  H+T 
Sbjct: 9   LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTE 68

Query: 394 PNVVMTCSVRSIQNRTYLTAGQESHCQL 477
               M  ++        L AGQ++HCQL
Sbjct: 69  TRATMNLALAG----DILAAGQDAHCQL 92


>AK023064-1|BAB14385.1|  417|Homo sapiens NA, nuclear gene encoding
           mitochondrial  protein.
          Length = 417

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +1

Query: 217 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETG 393
           L +  FPLY LQ   +  +++A GGGGA+ TG+ NG    +L     R  A  +  H+T 
Sbjct: 9   LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTE 68

Query: 394 PNVVMTCSVRSIQNRTYLTAGQESHCQL 477
               M  ++        L AGQ++HCQL
Sbjct: 69  TRATMNLALAG----DILAAGQDAHCQL 92


>AF227166-1|AAF74572.1|  417|Homo sapiens prolactin regulatory
           binding-element protein protein.
          Length = 417

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +1

Query: 217 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETG 393
           L +  FPLY LQ   +  +++A GGGGA+ TG+ NG    +L     R  A  +  H+T 
Sbjct: 9   LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTE 68

Query: 394 PNVVMTCSVRSIQNRTYLTAGQESHCQL 477
               M  ++        L AGQ++HCQL
Sbjct: 69  TRATMNLALAG----DILAAGQDAHCQL 92


>AF203687-1|AAF19192.1|  417|Homo sapiens SEC12 protein.
          Length = 417

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +1

Query: 217 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETG 393
           L +  FPLY LQ   +  +++A GGGGA+ TG+ NG    +L     R  A  +  H+T 
Sbjct: 9   LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTE 68

Query: 394 PNVVMTCSVRSIQNRTYLTAGQESHCQL 477
               M  ++        L AGQ++HCQL
Sbjct: 69  TRATMNLALAG----DILAAGQDAHCQL 92


>AC013403-6|AAX93170.1|  417|Homo sapiens unknown protein.
          Length = 417

 Score = 55.2 bits (127), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +1

Query: 217 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETG 393
           L +  FPLY LQ   +  +++A GGGGA+ TG+ NG    +L     R  A  +  H+T 
Sbjct: 9   LYRAPFPLYALQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTE 68

Query: 394 PNVVMTCSVRSIQNRTYLTAGQESHCQL 477
               M  ++        L AGQ++HCQL
Sbjct: 69  TRATMNLALAG----DILAAGQDAHCQL 92


>AF226684-1|AAG01692.1|  417|Homo sapiens prolactin regulatory
           element-binding protein protein.
          Length = 417

 Score = 53.6 bits (123), Expect = 6e-07
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = +1

Query: 217 LAKVDFPLYTLQTLTNRHVIVA-GGGGASNTGVANGFEIFELSHNGKRFVAEEVMRHETG 393
           L +  FPLY  Q   +  +++A GGGGA+ TG+ NG    +L     R  A  +  H+T 
Sbjct: 9   LYRAPFPLYAFQVDPSTGLLIAAGGGGAAKTGIKNGVHFLQLELINGRLSASLLHSHDTE 68

Query: 394 PNVVMTCSVRSIQNRTYLTAGQESHCQL 477
               M  ++        L AGQ++HCQL
Sbjct: 69  TRATMNLALAG----DILAAGQDAHCQL 92


>BC109271-1|AAI09272.1|  462|Homo sapiens ZSCAN29 protein protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 316 NGFEI-FELSHNGKRFVAEEVMRHETGPNVVMTCSVRSIQNRTYLTAGQESHCQ 474
           +GFE  FE   N KR ++EEV  H T    ++  S R I    +   G ES C+
Sbjct: 173 SGFEAGFENEDNSKRDISEEVQLHRT----LLARSERKIPRYLHQGKGNESDCR 222


>BC017179-1|AAH17179.2|  523|Homo sapiens ZSCAN29 protein protein.
          Length = 523

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 319 GFEI-FELSHNGKRFVAEEVMRHETGPNVVMTCSVRSIQNRTYLTAGQESHCQ 474
           GFE  FE   N KR ++EEV  H T    ++  S R I    +   G ES C+
Sbjct: 235 GFEAGFENEDNSKRDISEEVQLHRT----LLARSERKIPRYLHQGKGNESDCR 283


>AK093186-1|BAC04088.1|  732|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35867 fis, clone TESTI2007922, weakly similar to
           ZINC FINGER PROTEIN 29. ).
          Length = 732

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 319 GFEI-FELSHNGKRFVAEEVMRHETGPNVVMTCSVRSIQNRTYLTAGQESHCQ 474
           GFE  FE   N KR ++EEV  H T    ++  S R I    +   G ES C+
Sbjct: 444 GFEAGFENEDNSKRDISEEVQLHRT----LLARSERKIPRYLHQGKGNESDCR 492


>AF525399-1|AAO14995.1|  851|Homo sapiens KOX31-like zinc finger
           protein protein.
          Length = 851

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 319 GFEI-FELSHNGKRFVAEEVMRHETGPNVVMTCSVRSIQNRTYLTAGQESHCQ 474
           GFE  FE   N KR ++EEV  H T    ++  S R I    +   G ES C+
Sbjct: 563 GFEAGFENEDNSKRDISEEVQLHRT----LLARSERKIPRYLHQGKGNESDCR 611


>BX537426-1|CAD97668.1|  355|Homo sapiens hypothetical protein
           protein.
          Length = 355

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 338 SSNISNPFATPVFDAPPPPATMTCR 264
           SS+I+ P   PV   PPPP TM+CR
Sbjct: 35  SSDIA-PLPPPVTLVPPPPDTMSCR 58


>BC012137-1|AAH12137.2|  355|Homo sapiens syntaxin 5 protein.
          Length = 355

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 338 SSNISNPFATPVFDAPPPPATMTCR 264
           SS+I+ P   PV   PPPP TM+CR
Sbjct: 35  SSDIA-PLPPPVTLVPPPPDTMSCR 58


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,742,873
Number of Sequences: 237096
Number of extensions: 1856858
Number of successful extensions: 4044
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4023
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)