Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_I16
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75711-2|CAB00033.2|  425|Caenorhabditis elegans Hypothetical pr...    58   7e-09
Z75526-4|CAA99770.1|  360|Caenorhabditis elegans Hypothetical pr...    32   0.31 
EF409995-1|ABN58742.1|  410|Caenorhabditis elegans reduced folat...    32   0.31 
Z81061-1|CAB02934.3|  436|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AC006713-1|AAK68407.2|  310|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z82085-2|CAB04982.1|  247|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z70754-9|CAA94777.2|   70|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>Z75711-2|CAB00033.2|  425|Caenorhabditis elegans Hypothetical
           protein K02B12.3 protein.
          Length = 425

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
 Frame = +1

Query: 214 LLAKVDFPLYTLQTLTNRHVIVAGGGGASNTGVANGFE--IFEL--SHNGKRFVAEEVMR 381
           L+ +   P Y L+T+ +RH++VAGGGGAS TGV N  +  +F    ++    F ++ V +
Sbjct: 14  LIGESGIPAYCLKTIGSRHILVAGGGGASKTGVLNEIQTHLFTTGSANQDVGFQSKCVGK 73

Query: 382 HETGP----NVVMTCSVRSIQNRTYLTAGQESHCQLY 480
            +TG     N+ + C+   I  +  + AGQE+ C LY
Sbjct: 74  FDTGSMATMNMDVACAFDEISAKYVIAAGQENLCALY 110


>Z75526-4|CAA99770.1|  360|Caenorhabditis elegans Hypothetical
           protein C06H2.4 protein.
          Length = 360

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = -2

Query: 389 VSWRITSSATNLFPLCDSSNISNPFATPVFDAPPPPATMTCRFVKVWSV*SGKSTLANNP 210
           +SWR T++   L+        + PF TP   +P    T+   + +V+   +    LA  P
Sbjct: 1   MSWRTTTAILCLYGAVKEFRPATPFLTPFLASPEKNITLDELYSQVYPYWTYSYMLALIP 60

Query: 209 SDLLGDILSY 180
             +L DIL Y
Sbjct: 61  MFILTDILRY 70


>EF409995-1|ABN58742.1|  410|Caenorhabditis elegans reduced folate
           carrier protein.
          Length = 410

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 20/70 (28%), Positives = 32/70 (45%)
 Frame = -2

Query: 389 VSWRITSSATNLFPLCDSSNISNPFATPVFDAPPPPATMTCRFVKVWSV*SGKSTLANNP 210
           +SWR T++   L+        + PF TP   +P    T+   + +V+   +    LA  P
Sbjct: 1   MSWRTTTAILCLYGAVKEFRPATPFLTPFLASPEKNITLDELYSQVYPYWTYSYMLALIP 60

Query: 209 SDLLGDILSY 180
             +L DIL Y
Sbjct: 61  MFILTDILRY 70


>Z81061-1|CAB02934.3|  436|Caenorhabditis elegans Hypothetical
           protein F14H8.1 protein.
          Length = 436

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 325 EIFELSHNGKRFVAEEVMRH 384
           E FEL  NG RF+AE+V  H
Sbjct: 127 ETFELERNGVRFLAEQVSHH 146


>AC006713-1|AAK68407.2|  310|Caenorhabditis elegans Hypothetical
           protein Y119D3A.4 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = +2

Query: 266 DMSLLLEEEEHRTQVSQMDLKYLNCHIM 349
           D+S++L+E+  R Q+ ++++ Y NC ++
Sbjct: 51  DLSVVLDEDSVRIQLDRIEIIYRNCSLL 78


>Z82085-2|CAB04982.1|  247|Caenorhabditis elegans Hypothetical
           protein ZK218.3 protein.
          Length = 247

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -2

Query: 404 TTLGPVSWRITSSATNLFPLCDSSNISNPFATPVFDAPPPPATMTCRFVKVWSV*SGKST 225
           TT+ PV +  T  ATN       S  ++ +A    +  P P T T R +K ++  +G+  
Sbjct: 33  TTVDPVDFVYTPGATNCVNAYADSTCASLYAITTDEPAPVPGTSTPRPLKCFT--AGEDA 90

Query: 224 LANNPSDLL 198
           +     DL+
Sbjct: 91  IGAVDPDLV 99


>Z70754-9|CAA94777.2|   70|Caenorhabditis elegans Hypothetical
           protein F58E6.7 protein.
          Length = 70

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 480 VQLTVALLSRCEIRPVLDAPYGTRHHDIR 394
           + L + L+S  E+RPV+ + Y   HH  R
Sbjct: 13  ILLFIFLISNVELRPVMKSGYSKNHHLFR 41


>U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical
           protein W06A11.2 protein.
          Length = 797

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +1

Query: 322 FEIFELSHNGKRFVAEEVMRHETGPNVVMTCSVRSIQNRTYLTAGQESHCQ 474
           +EI +L  +G+ F A E +R         +C +R     +YL    E  CQ
Sbjct: 430 YEIRDLLESGQHFNASEFLRKIINLIETSSCPIRKKHGISYLIELAEHQCQ 480


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,741,586
Number of Sequences: 27780
Number of extensions: 282101
Number of successful extensions: 892
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)