Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_I15
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       68   9e-14
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    26   0.28 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 67.7 bits (158), Expect = 9e-14
 Identities = 34/79 (43%), Positives = 46/79 (58%)
 Frame = +1

Query: 412 SIQINTR*L*VGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 591
           +IQ+N      G  V  PI+ FE A   + V   +K  GYK+PTP+Q    PI M+G++L
Sbjct: 181 NIQVNVS----GDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDL 236

Query: 592 XGVXQTGSGKTLAYILPAI 648
               QTGSGKT A+ +P I
Sbjct: 237 MACAQTGSGKTAAFAVPII 255


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 537 TDAHSSSRLADSYVWKEFXWRXPNGFRQNVGLHLASH 647
           +D+ +  +L + Y WK   +  PNG+ +   +   S+
Sbjct: 16  SDSQAQEKLKNIYSWKALEFAFPNGYAKLAAIKSGSY 52


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = -2

Query: 326 PIWASHVLPSREFFFP 279
           P+W  H+   R   FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = -2

Query: 326 PIWASHVLPSREFFFP 279
           P+W  H+   R   FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -1

Query: 234 TETNYRRICCLLQIWNHRFHGYYSN 160
           T  N RR    ++ W H F   Y N
Sbjct: 416 TVENNRRNPWFVEFWEHHFQCRYPN 440


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,118
Number of Sequences: 438
Number of extensions: 3627
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)