Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_I13
         (575 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23 p...   206   6e-53
X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein pr...   205   8e-53
X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17 pro...   205   8e-53
BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.       205   8e-53
BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23 p...   205   8e-53
BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23 p...   205   8e-53
BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal pr...   205   8e-53
AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23 p...   205   8e-53
BC034378-1|AAH34378.1|   77|Homo sapiens RPL23 protein protein.       104   2e-22
BC105633-1|AAI05634.1|  757|Homo sapiens tumor endothelial marke...    30   6.7  
BC104484-1|AAI04485.1|  757|Homo sapiens tumor endothelial marke...    30   6.7  
BC051340-1|AAH51340.1|  757|Homo sapiens CD248 molecule, endosia...    30   6.7  
AJ295846-1|CAC34381.1|  757|Homo sapiens endosialin protein prot...    30   6.7  
AF279142-1|AAG00867.1|  757|Homo sapiens tumor endothelial marke...    30   6.7  
AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1...    29   8.9  
AL834486-1|CAD39144.1|  568|Homo sapiens hypothetical protein pr...    29   8.9  
AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr...    29   8.9  
AK131400-1|BAD18547.1|  852|Homo sapiens protein ( Homo sapiens ...    29   8.9  
AK128850-1|BAC87646.1|  673|Homo sapiens protein ( Homo sapiens ...    29   8.9  
AJ313524-1|CAC86408.1|  852|Homo sapiens putative binding protei...    29   8.9  
AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.     29   8.9  

>BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  206 bits (502), Expect = 6e-53
 Identities = 94/110 (85%), Positives = 103/110 (93%)
 Frame = +3

Query: 81  LGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV 260
           +GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVV 81

Query: 261 IRQRKPFXXRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLWPR 410
           IRQRK +  +DG F+YFEDNAGVI NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 82  IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein
           protein.
          Length = 140

 Score =  205 bits (501), Expect = 8e-53
 Identities = 94/110 (85%), Positives = 103/110 (93%)
 Frame = +3

Query: 81  LGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV 260
           +GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVV 81

Query: 261 IRQRKPFXXRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLWPR 410
           IRQRK +  +DG F+YFEDNAGVI NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 82  IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17
           protein.
          Length = 140

 Score =  205 bits (501), Expect = 8e-53
 Identities = 94/110 (85%), Positives = 103/110 (93%)
 Frame = +3

Query: 81  LGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV 260
           +GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVV 81

Query: 261 IRQRKPFXXRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLWPR 410
           IRQRK +  +DG F+YFEDNAGVI NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 82  IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.
          Length = 140

 Score =  205 bits (501), Expect = 8e-53
 Identities = 94/110 (85%), Positives = 103/110 (93%)
 Frame = +3

Query: 81  LGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV 260
           +GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVV 81

Query: 261 IRQRKPFXXRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLWPR 410
           IRQRK +  +DG F+YFEDNAGVI NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 82  IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  205 bits (501), Expect = 8e-53
 Identities = 94/110 (85%), Positives = 103/110 (93%)
 Frame = +3

Query: 81  LGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV 260
           +GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVV 81

Query: 261 IRQRKPFXXRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLWPR 410
           IRQRK +  +DG F+YFEDNAGVI NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 82  IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  205 bits (501), Expect = 8e-53
 Identities = 94/110 (85%), Positives = 103/110 (93%)
 Frame = +3

Query: 81  LGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV 260
           +GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVV 81

Query: 261 IRQRKPFXXRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLWPR 410
           IRQRK +  +DG F+YFEDNAGVI NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 82  IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal
           protein L23 protein.
          Length = 134

 Score =  205 bits (501), Expect = 8e-53
 Identities = 94/110 (85%), Positives = 103/110 (93%)
 Frame = +3

Query: 81  LGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV 260
           +GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVV
Sbjct: 16  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVV 75

Query: 261 IRQRKPFXXRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLWPR 410
           IRQRK +  +DG F+YFEDNAGVI NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 76  IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 125


>AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  205 bits (501), Expect = 8e-53
 Identities = 94/110 (85%), Positives = 103/110 (93%)
 Frame = +3

Query: 81  LGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVV 260
           +GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVV
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVV 81

Query: 261 IRQRKPFXXRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLWPR 410
           IRQRK +  +DG F+YFEDNAGVI NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 82  IRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC034378-1|AAH34378.1|   77|Homo sapiens RPL23 protein protein.
          Length = 77

 Score =  104 bits (250), Expect = 2e-22
 Identities = 47/54 (87%), Positives = 53/54 (98%)
 Frame = +3

Query: 81  LGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 242
           +GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKK
Sbjct: 22  VGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKK 75


>BC105633-1|AAI05634.1|  757|Homo sapiens tumor endothelial marker
           1, precursor protein.
          Length = 757

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -2

Query: 238 FRSSGLPFLTVATIMSPEPAAGSLFRRPLIPWT--AITYRFFAPVLSAQLITAPSWESPG 65
           + SS L       + +  P   S  + P+IP T  A++     PV++A     PS   PG
Sbjct: 440 YHSSVLSVTRPVVVSATRPTLPSAHQPPVIPATHPALSRDHQIPVIAANYPDLPSAYQPG 499

Query: 64  RYGISLPREPP 32
              +S   +PP
Sbjct: 500 ILSVSHSAQPP 510


>BC104484-1|AAI04485.1|  757|Homo sapiens tumor endothelial marker
           1, precursor protein.
          Length = 757

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -2

Query: 238 FRSSGLPFLTVATIMSPEPAAGSLFRRPLIPWT--AITYRFFAPVLSAQLITAPSWESPG 65
           + SS L       + +  P   S  + P+IP T  A++     PV++A     PS   PG
Sbjct: 440 YHSSVLSVTRPVVVSATRPTLPSAHQPPVIPATHPALSRDHQIPVIAANYPDLPSAYQPG 499

Query: 64  RYGISLPREPP 32
              +S   +PP
Sbjct: 500 ILSVSHSAQPP 510


>BC051340-1|AAH51340.1|  757|Homo sapiens CD248 molecule, endosialin
           protein.
          Length = 757

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -2

Query: 238 FRSSGLPFLTVATIMSPEPAAGSLFRRPLIPWT--AITYRFFAPVLSAQLITAPSWESPG 65
           + SS L       + +  P   S  + P+IP T  A++     PV++A     PS   PG
Sbjct: 440 YHSSVLSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANYPDLPSAYQPG 499

Query: 64  RYGISLPREPP 32
              +S   +PP
Sbjct: 500 ILSVSHSAQPP 510


>AJ295846-1|CAC34381.1|  757|Homo sapiens endosialin protein
           protein.
          Length = 757

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -2

Query: 238 FRSSGLPFLTVATIMSPEPAAGSLFRRPLIPWT--AITYRFFAPVLSAQLITAPSWESPG 65
           + SS L       + +  P   S  + P+IP T  A++     PV++A     PS   PG
Sbjct: 440 YHSSVLSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANYPDLPSAYQPG 499

Query: 64  RYGISLPREPP 32
              +S   +PP
Sbjct: 500 ILSVSHSAQPP 510


>AF279142-1|AAG00867.1|  757|Homo sapiens tumor endothelial marker 1
           precursor protein.
          Length = 757

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
 Frame = -2

Query: 238 FRSSGLPFLTVATIMSPEPAAGSLFRRPLIPWT--AITYRFFAPVLSAQLITAPSWESPG 65
           + SS L       + +  P   S  + P+IP T  A++     PV++A     PS   PG
Sbjct: 440 YHSSVLSVTRPVVVSATHPTLPSAHQPPVIPATHPALSRDHQIPVIAANYPDLPSAYQPG 499

Query: 64  RYGISLPREPP 32
              +S   +PP
Sbjct: 500 ILSVSHSAQPP 510


>AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1
            protein.
          Length = 1906

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 409  RGHRSAHSLATGPVMAEPFISPLLLXMTP 323
            +G   AH L+ GP+   P++ P LL +TP
Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477


>AL834486-1|CAD39144.1|  568|Homo sapiens hypothetical protein
           protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 409 RGHRSAHSLATGPVMAEPFISPLLLXMTP 323
           +G   AH L+ GP+   P++ P LL +TP
Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139


>AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein
           protein.
          Length = 1285

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 409 RGHRSAHSLATGPVMAEPFISPLLLXMTP 323
           +G   AH L+ GP+   P++ P LL +TP
Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856


>AK131400-1|BAD18547.1|  852|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16493 fis, clone CTONG3004550, weakly  similar
           to Homo sapiens SH3-domain binding protein 4 (SH3BP4).
           ).
          Length = 852

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 245 YLFPEFRFTLFDCGHNHVPG 186
           Y+ P F   L  CGHN++PG
Sbjct: 379 YIHPNFTVVLTVCGHNYMPG 398


>AK128850-1|BAC87646.1|  673|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46632 fis, clone TRACH2024730, weakly  similar
           to Homo sapiens SH3-domain binding protein 4 (SH3BP4).
           ).
          Length = 673

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 245 YLFPEFRFTLFDCGHNHVPG 186
           Y+ P F   L  CGHN++PG
Sbjct: 200 YIHPSFTVVLTVCGHNYMPG 219


>AJ313524-1|CAC86408.1|  852|Homo sapiens putative binding protein
           7a5 protein.
          Length = 852

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 245 YLFPEFRFTLFDCGHNHVPG 186
           Y+ P F   L  CGHN++PG
Sbjct: 379 YIHPSFTVVLTVCGHNYMPG 398


>AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.
          Length = 1644

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 409  RGHRSAHSLATGPVMAEPFISPLLLXMTP 323
            +G   AH L+ GP+   P++ P LL +TP
Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,522,244
Number of Sequences: 237096
Number of extensions: 1742533
Number of successful extensions: 3559
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3558
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)