Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_I04
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 182 2e-46
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 177 6e-45
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 177 8e-45
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 34 0.11
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 1.1
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 29 3.3
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 28 5.7
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 5.7
09_06_0319 - 22293869-22293906,22294539-22295808 27 9.9
08_02_0567 + 18769742-18769790,18769928-18771351 27 9.9
06_02_0084 - 11547820-11548773 27 9.9
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 27 9.9
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 182 bits (444), Expect = 2e-46
Identities = 85/127 (66%), Positives = 98/127 (77%)
Frame = +2
Query: 275 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 454
KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++S
Sbjct: 78 KNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 137
Query: 455 VRSSDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYERDEFDKLREXGRLANDGCIV 634
VR + EALRRAKFKFPGRQKI S KWGFTK+ R+E+ KL+ GR+ +DG
Sbjct: 138 VRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNA 197
Query: 635 QYRPEHG 655
Q HG
Sbjct: 198 QLLGSHG 204
Score = 137 bits (331), Expect = 8e-33
Identities = 62/94 (65%), Positives = 70/94 (74%)
Frame = +1
Query: 43 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 222
MGRRPARCYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 223 SSEALEAGRICCNKYLAKELRKGSVPYPHETSPF 324
SSEALEA RI CNKY+ K K + PF
Sbjct: 61 SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPF 94
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 177 bits (431), Expect = 6e-45
Identities = 81/127 (63%), Positives = 97/127 (76%)
Frame = +2
Query: 275 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 454
K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ ++S
Sbjct: 385 KHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLS 444
Query: 455 VRSSDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYERDEFDKLREXGRLANDGCIV 634
VR D A EALRRAKFKFPGRQ++ S KWGFT+++RDE+ KL+ GR+ DG
Sbjct: 445 VRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTRFKRDEYLKLKSEGRIVPDGVNA 504
Query: 635 QYRPEHG 655
+ HG
Sbjct: 505 KLLTRHG 511
Score = 132 bits (320), Expect = 2e-31
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = +1
Query: 55 PARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEA 234
P RCYR KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEA
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEA 371
Query: 235 LEAGRICCNKYLAKELRK 288
LEA RI CNKY+AK K
Sbjct: 372 LEAARIACNKYMAKHAGK 389
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 177 bits (430), Expect = 8e-45
Identities = 81/117 (69%), Positives = 93/117 (79%)
Frame = +2
Query: 275 KNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 454
K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++S
Sbjct: 74 KSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLS 133
Query: 455 VRSSDRWKAQVIEALRRAKFKFPGRQKIYVSXKWGFTKYERDEFDKLREXGRLANDG 625
VR EALRRAKFKFPGRQKI S KWGFTK+ RDE+ +L+ GR+ DG
Sbjct: 134 VRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDG 190
Score = 117 bits (281), Expect = 9e-27
Identities = 53/87 (60%), Positives = 62/87 (71%)
Frame = +1
Query: 64 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 243
CYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 244 GRICCNKYLAKELRKGSVPYPHETSPF 324
RI CNKY+ K K + PF
Sbjct: 64 ARIACNKYMTKSAGKDAFHLRVRVHPF 90
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +1
Query: 166 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLAKELR---KGSVP 300
T D P C +HL SD Y S E ++AG+ C L KEL +G VP
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVP 635
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 447 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 355
+ CP+ + + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 29.1 bits (62), Expect = 3.3
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Frame = +1
Query: 88 PYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICC--N 261
P P S G PD +++F R D P ++VS +Y+ SS+ +
Sbjct: 1053 PSPGSFSFGGDPDTFLQVFIWNGTRPVSRDGPWTGYMVSSQYQANSSDIFYFSIVNNEEK 1112
Query: 262 KYLAKELRKGSVPYPHETSPFP-RYPHQ*NVIMRWS**APDWDA--WCVWQASGY 417
+Y+ + +GS PY + +Y Q RW+ + WD W W + Y
Sbjct: 1113 RYITFSVSEGS-PYTRYVITYAGKYQFQ-----RWNISSSAWDVAEWPRWDCNYY 1161
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 281 SSLARYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 171
S +R+ ++ P+ ELSC ++T C H G S
Sbjct: 82 SGSSRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 401 GKPQGTVARVRIGQPIMSVRSSD 469
G PQ T+ R+ +G P +S++S+D
Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111
>09_06_0319 - 22293869-22293906,22294539-22295808
Length = 435
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 401 GKPQGTVARVRIGQPIMSVRSSD 469
G PQ T+ R+ +G P +S+ S D
Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365
>08_02_0567 + 18769742-18769790,18769928-18771351
Length = 490
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +2
Query: 386 MRGAFGKPQG--TVARVRIGQPIMSVRSSDRW-KAQVIEALRRAKFKFPGRQKI 538
MR G+ G A +RI + I + ++++ +AQV+EA RR F+ PGR ++
Sbjct: 24 MRTNGGEQMGGSEAAHIRIDEIIRRLDAAEKEAQAQVVEA-RREIFRVPGRHRL 76
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 478
L G DR Q GMRGA P RVR +P R +W+
Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 184 VESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVYFCSTG 68
+ S + + S GSW H D +++ DT+ CS+G
Sbjct: 758 MNSSNQQIGSPSEEDLGSWGH-HSDPSTVPDTILQCSSG 795
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,709,200
Number of Sequences: 37544
Number of extensions: 481202
Number of successful extensions: 1360
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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