Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_H23
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051746-1|AAK93170.1|  715|Drosophila melanogaster LD27216p pro...    80   3e-15
AE014134-61|AAF51531.1|  715|Drosophila melanogaster CG11490-PA ...    80   3e-15
AE014298-13|AAX52468.1|  545|Drosophila melanogaster CG3114-PG, ...    28   9.6  
AE014298-10|AAX52466.1|  579|Drosophila melanogaster CG3114-PF, ...    28   9.6  

>AY051746-1|AAK93170.1|  715|Drosophila melanogaster LD27216p
           protein.
          Length = 715

 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 19/155 (12%)
 Frame = +3

Query: 222 LFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTK-------CIEWRPNDLITIDSDTQ 380
           LFT DGVLLK +    ++D N+ G L +V+ +            +EW+PND I I  D+Q
Sbjct: 42  LFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDSIMIADDSQ 101

Query: 381 DQ-EWAVVNTVGRRQRTLXG----NI----TSDYANLRARIIKIPLXDLKTFRITRNNQQ 533
           DQ +WA+V+ +  R RT       N      S  A  R+R+++  L DL +  +    Q 
Sbjct: 102 DQGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQT 161

Query: 534 MQFSTK--PGVWQNTFYFQHGNAXIFVAYLKN-HL 629
           ++F  K   GV  + F+FQHGNA +FV  +++ HL
Sbjct: 162 IRFMRKGANGV-HSEFFFQHGNADLFVRSMRDQHL 195


>AE014134-61|AAF51531.1|  715|Drosophila melanogaster CG11490-PA
           protein.
          Length = 715

 Score = 79.8 bits (188), Expect = 3e-15
 Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 19/155 (12%)
 Frame = +3

Query: 222 LFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTK-------CIEWRPNDLITIDSDTQ 380
           LFT DGVLLK +    ++D N+ G L +V+ +            +EW+PND I I  D+Q
Sbjct: 42  LFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDSIMIADDSQ 101

Query: 381 DQ-EWAVVNTVGRRQRTLXG----NI----TSDYANLRARIIKIPLXDLKTFRITRNNQQ 533
           DQ +WA+V+ +  R RT       N      S  A  R+R+++  L DL +  +    Q 
Sbjct: 102 DQGDWALVDRISGRTRTTSECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQT 161

Query: 534 MQFSTK--PGVWQNTFYFQHGNAXIFVAYLKN-HL 629
           ++F  K   GV  + F+FQHGNA +FV  +++ HL
Sbjct: 162 IRFMRKGANGV-HSEFFFQHGNADLFVRSMRDQHL 195


>AE014298-13|AAX52468.1|  545|Drosophila melanogaster CG3114-PG,
           isoform G protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +3

Query: 183 TSSGDELHDQYKDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGT-KCIEWRPND-L 356
           + SGDE  D+  +L     +   T++  P  + N      + QNADGT   I+  PN+ +
Sbjct: 355 SQSGDE--DEDMELSNPPTIHTVTTMTPPTGNSNYTTQTVLSQNADGTVSLIQVDPNNPI 412

Query: 357 ITIDSDTQDQ 386
           IT+   T  Q
Sbjct: 413 ITLPDGTTAQ 422


>AE014298-10|AAX52466.1|  579|Drosophila melanogaster CG3114-PF,
           isoform F protein.
          Length = 579

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +3

Query: 183 TSSGDELHDQYKDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGT-KCIEWRPND-L 356
           + SGDE  D+  +L     +   T++  P  + N      + QNADGT   I+  PN+ +
Sbjct: 355 SQSGDE--DEDMELSNPPTIHTVTTMTPPTGNSNYTTQTVLSQNADGTVSLIQVDPNNPI 412

Query: 357 ITIDSDTQDQ 386
           IT+   T  Q
Sbjct: 413 ITLPDGTTAQ 422


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,420,919
Number of Sequences: 53049
Number of extensions: 596178
Number of successful extensions: 1236
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)