Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_H23
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U41553-5|AAO91694.1|  468|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AC199158-9|ABO33285.1|  229|Caenorhabditis elegans Hypothetical ...    28   6.6  
AC199158-5|ABO33288.1|  229|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
            H06O01.2 protein.
          Length = 1461

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/71 (26%), Positives = 31/71 (43%)
 Frame = +2

Query: 164  YHHHHVYEFGR*ITRPVQRLVHARRGTSKDQCRSAGLRFQLNRDALHCTERRRN*MHRME 343
            +HHHH ++      +P +   H  R   KD+ R+ G R     D    T +  +  H  +
Sbjct: 1389 HHHHHHHKSKE--EKPKEAKDHKERDREKDRERNRGER---RMDHGEGTSKDHHREHHKD 1443

Query: 344  TERLDHHRFRH 376
              +  HHR +H
Sbjct: 1444 HHKDHHHREQH 1454


>U41553-5|AAO91694.1|  468|Caenorhabditis elegans Hypothetical
           protein ZK1193.5a protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 22/79 (27%), Positives = 39/79 (49%)
 Frame = +3

Query: 195 DELHDQYKDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTKCIEWRPNDLITIDSD 374
           D + + +KD+ +   V+LK  + +P +D NS+  +  V+N      +   PN L  +D+ 
Sbjct: 82  DTVENLFKDISSH--VVLKI-LSKPSTDSNSVQCISEVKNKLLKAAVNKNPNVLTNVDN- 137

Query: 375 TQDQEWAVVNTVGRRQRTL 431
              Q   V+NT+     TL
Sbjct: 138 --QQVKDVINTIIAGDETL 154


>AC199158-9|ABO33285.1|  229|Caenorhabditis elegans Hypothetical
           protein AC8.12 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 25/102 (24%), Positives = 42/102 (41%)
 Frame = +3

Query: 216 KDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTKCIEWRPNDLITIDSDTQDQEWA 395
           K L+ +  V+  T   RP+ D N +  L  +       C  + PN+ +        ++  
Sbjct: 77  KSLYARYSVINSTQYVRPIIDLNKVERLKPLMAR--MLCQLYMPNNAVHEAFSATSKDGI 134

Query: 396 VVNTVGRRQRTLXGNITSDYANLRARIIKIPLXDLKTFRITR 521
           VV+    R  T  G        +R+R+IK P  DL    ++R
Sbjct: 135 VVSQQQLRDLTRRG---CPDTLIRSRVIKHPTNDLTARDVSR 173


>AC199158-5|ABO33288.1|  229|Caenorhabditis elegans Hypothetical
           protein AC8.7 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 25/102 (24%), Positives = 42/102 (41%)
 Frame = +3

Query: 216 KDLFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTKCIEWRPNDLITIDSDTQDQEWA 395
           K L+ +  V+  T   RP+ D N +  L  +       C  + PN+ +        ++  
Sbjct: 77  KSLYARYSVINSTQYVRPIIDLNKVERLKPLMAR--MLCQLYMPNNAVHEAFSATSKDGI 134

Query: 396 VVNTVGRRQRTLXGNITSDYANLRARIIKIPLXDLKTFRITR 521
           VV+    R  T  G        +R+R+IK P  DL    ++R
Sbjct: 135 VVSQQQLRDLTRRG---CPDTLIRSRVIKHPTNDLTARDVSR 173


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,735,660
Number of Sequences: 27780
Number of extensions: 311894
Number of successful extensions: 823
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)