Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_H22
(652 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 223 3e-57
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 203 2e-51
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 186 4e-46
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 161 2e-38
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 156 4e-37
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 132 7e-30
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 130 3e-29
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 128 1e-28
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 125 8e-28
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 122 7e-27
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 108 1e-22
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 95 1e-18
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 85 1e-15
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 83 7e-15
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 77 4e-13
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 77 5e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 68 2e-10
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 55 2e-06
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 53 5e-06
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 52 9e-06
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 52 1e-05
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 51 3e-05
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 50 4e-05
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 46 6e-04
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 45 0.002
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 44 0.002
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 44 0.002
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 43 0.006
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.017
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 42 0.017
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 38 0.21
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 36 0.64
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 3.4
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 34 3.4
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;... 33 4.5
UniRef50_A3JY02 Cluster: Putative uncharacterized protein; n=2; ... 33 4.5
UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR fam... 33 7.8
UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;... 33 7.8
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 223 bits (545), Expect = 3e-57
Identities = 105/143 (73%), Positives = 125/143 (87%)
Frame = +2
Query: 191 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 370
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 371 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 550
MVKKWQTLIE ++DV TTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ I KM I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 551 ITRDVTNSELREVVNKLIPDSIA 619
I R++T+++L+ VV KL+PDSIA
Sbjct: 175 IKREITSTDLKGVVEKLLPDSIA 197
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +3
Query: 36 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAP 134
GK K + KK KK+VDPFTRKDWYDVKAP
Sbjct: 4 GKNKGVSKGGKKGSKKKVVDPFTRKDWYDVKAP 36
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 136 SMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 228
+MF RQVG TLVNRTQ + ++G+ F
Sbjct: 37 NMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 203 bits (496), Expect = 2e-51
Identities = 102/149 (68%), Positives = 119/149 (79%)
Frame = +2
Query: 170 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 349
L T TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 350 LTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 529
LT DK+ MVKKWQT+IEA++DV TTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 530 XKKMCEIITRDVTNSELREVVNKLIPDSI 616
KKM EI+TR+V ++L+EVVNKLIPDSI
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSI 193
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +3
Query: 36 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAP 134
GK K + KK KK+VDPF++KDWYDVKAP
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAP 36
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 186 bits (453), Expect = 4e-46
Identities = 92/142 (64%), Positives = 111/142 (78%)
Frame = +2
Query: 191 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 370
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 371 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 550
+V+KWQTLIEA++DV TTD Y LR+FCI FT K +KTCYAQ +Q+R I +KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 551 ITRDVTNSELREVVNKLIPDSI 616
+T T+ +L+E+V K IP+SI
Sbjct: 567 MTNMATSCDLKELVKKFIPESI 588
Score = 39.1 bits (87), Expect = 0.090
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = +3
Query: 36 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAP 134
GK K + KK KK DPF +KDWYD+KAP
Sbjct: 399 GKNKRISKG-KKGGKKKAADPFAKKDWYDIKAP 430
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 161 bits (390), Expect = 2e-38
Identities = 80/142 (56%), Positives = 108/142 (76%)
Frame = +2
Query: 191 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 370
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 371 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 550
++ KW TLIE +DV TTDGY LRVF I FT K ++KT YA+ ++V+AI KKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 551 ITRDVTNSELREVVNKLIPDSI 616
+T V++++L+ VV+ LI S+
Sbjct: 171 LTETVSSNDLKTVVDYLIGVSL 192
Score = 33.9 bits (74), Expect = 3.4
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 84 KIVDPFTRKDWYDVKAP 134
K VDPFTRK+WY V+AP
Sbjct: 14 KKVDPFTRKEWYVVRAP 30
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 156 bits (379), Expect = 4e-37
Identities = 76/141 (53%), Positives = 102/141 (72%)
Frame = +2
Query: 194 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 373
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 374 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEII 553
+V+KWQ+LIEAN+ V TTD Y+LR+F I T + +KT YA +Q+RAI +KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 554 TRDVTNSELREVVNKLIPDSI 616
R+ + L+++ NKLIP+ I
Sbjct: 173 QREASTCTLQQLTNKLIPEVI 193
Score = 39.9 bits (89), Expect = 0.052
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = +3
Query: 36 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKAP 134
GK K + KK L KK DPF RKDWY +KAP
Sbjct: 4 GKNKRLSKG-KKGLKKKTQDPFARKDWYGIKAP 35
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 132 bits (319), Expect = 7e-30
Identities = 68/137 (49%), Positives = 94/137 (68%)
Frame = +2
Query: 191 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 370
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 371 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 550
+VKKW TLIE ++DV TTDG+++R+FCIGFT++ S +KT YA+ Q++ I K M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 551 ITRDVTNSELREVVNKL 601
IT++ + EL + V+ L
Sbjct: 174 ITKEAASRELTQFVDYL 190
Score = 36.3 bits (80), Expect = 0.64
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +3
Query: 33 SGKIKACRRA-VKKVLTKKIVDPFTRKDWYDVKAP 134
+GK K + VKK +KI +PF++K+WY+VK P
Sbjct: 3 TGKNKKYKAGNVKKGSKRKIAEPFSKKEWYNVKVP 37
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 130 bits (314), Expect = 3e-29
Identities = 66/148 (44%), Positives = 94/148 (63%), Gaps = 3/148 (2%)
Frame = +2
Query: 170 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 349
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 350 LTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 520
+T D+L M++KWQTLIEA +D T DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 521 RAIXKKMCEIITRDVTNSELREVVNKLI 604
RAI +K+ IT + + E LI
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLI 195
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 66 KKVLTKKIVDPFTRKDWYDVKAPL 137
KK K+ +DP +RK+WYD +AP+
Sbjct: 15 KKGAKKRTIDPLSRKEWYDFRAPI 38
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 128 bits (309), Expect = 1e-28
Identities = 62/113 (54%), Positives = 79/113 (69%)
Frame = +2
Query: 278 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCI 457
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DV TTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 458 GFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSELREVVNKLIPDSI 616
FT K Q+ YAQ T+++ + ++ E++ R+V +L+ VV KLIPDSI
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSI 118
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 125 bits (302), Expect = 8e-28
Identities = 60/143 (41%), Positives = 94/143 (65%)
Frame = +2
Query: 191 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 370
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 371 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 550
M+KK QTLIE ++ + DGY+LR+F I FT QRKT YAQ +Q++ I KK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 551 ITRDVTNSELREVVNKLIPDSIA 619
+ ++V+ + +++ +S+A
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLA 193
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 122 bits (294), Expect = 7e-27
Identities = 53/137 (38%), Positives = 89/137 (64%)
Frame = +2
Query: 191 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 370
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 371 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEI 550
+++KW T +E ++V T DGY +R+F + FT + Q + CYA+ V+ + ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 551 ITRDVTNSELREVVNKL 601
I R ++ +++E V+ L
Sbjct: 175 IKRRLSKVQIKEAVSLL 191
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 108 bits (260), Expect = 1e-22
Identities = 65/143 (45%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +2
Query: 191 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 370
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 371 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGF-TNKDSLSQRKTCYAQHTQVRAIXKKMCE 547
V KWQ ++EA+ DV T D Y+L +FC+G+ TN + R+ AQ+ QV I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 548 IITRDVTNSELREVVNKLIPDSI 616
I+ D ++L+EV+NKL+PD++
Sbjct: 156 IM--DQRRTDLKEVLNKLVPDNV 176
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/133 (35%), Positives = 79/133 (59%)
Frame = +2
Query: 218 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 397
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 398 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 577
IEA D+ DG V RVF +G T + +KTCY +H+ + I K M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 578 LREVVNKLIPDSI 616
+++++ KL +++
Sbjct: 133 VQKIMKKLANETV 145
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 85.4 bits (202), Expect = 1e-15
Identities = 45/142 (31%), Positives = 74/142 (52%)
Frame = +2
Query: 176 TVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLT 355
T ++A++ + RV+EV+L DL + KF L + V L NFHGMD+T
Sbjct: 47 TKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDIT 106
Query: 356 TDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXK 535
K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +
Sbjct: 107 RHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRA 166
Query: 536 KMCEIITRDVTNSELREVVNKL 601
+ E + ++ + +V KL
Sbjct: 167 GIYETLHNELGKVSIPVLVTKL 188
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 82.6 bits (195), Expect = 7e-15
Identities = 39/133 (29%), Positives = 74/133 (55%)
Frame = +2
Query: 203 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 382
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 383 KWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRD 562
KW TLIE ++ T DGY L++F I + K + KT Y +Q RA+ +++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 563 VTNSELREVVNKL 601
N ++++ ++++
Sbjct: 172 GINMDIKDFIHRI 184
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 77.0 bits (181), Expect = 4e-13
Identities = 43/72 (59%), Positives = 52/72 (72%)
Frame = +2
Query: 170 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 349
L T TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 350 LTTDKLRWMVKK 385
LT+DK+ ++K
Sbjct: 102 LTSDKITSQIRK 113
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +2
Query: 527 IXKKMCEIITRDVTNSELREVVNKLIPDSI 616
I KKM EI+TR+V ++L+EVVNKLIPDSI
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSI 140
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +3
Query: 39 KIKACRRAVKKVLTKKIVDPFTRKDWYDVKAP 134
K K + KK KK+VDPF++KDWYDV AP
Sbjct: 5 KNKRLTKGGKKGAKKKVVDPFSKKDWYDVNAP 36
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 76.6 bits (180), Expect = 5e-13
Identities = 43/141 (30%), Positives = 75/141 (53%)
Frame = +2
Query: 194 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 373
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 374 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEII 553
+++K++T+I+A++D T DG++LR+F IGFT K + S + YA + R + M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 554 TRDVTNSELREVVNKLIPDSI 616
T + + ++ + + I
Sbjct: 169 TDACEANGVEQLCKDFVDEKI 189
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2
Query: 170 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 349
L T TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 350 LTTD 361
L+ D
Sbjct: 105 LSCD 108
Score = 37.1 bits (82), Expect = 0.36
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 57 RAVKKVLTKKIVDPFTRKDWYDVKAP 134
R+ KK KK VD ++KDWYD+KAP
Sbjct: 11 RSSKKGAKKKAVDQISKKDWYDMKAP 36
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 54.8 bits (126), Expect = 2e-06
Identities = 38/134 (28%), Positives = 67/134 (50%)
Frame = +2
Query: 218 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 397
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 398 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 577
I+AN+ V T DG+ +RV I T K A+ +Q+ +I + M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 578 LREVVNKLIPDSIA 619
E +N+++ +A
Sbjct: 153 FTEFINEVVTGKVA 166
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 53.2 bits (122), Expect = 5e-06
Identities = 40/133 (30%), Positives = 63/133 (47%)
Frame = +2
Query: 206 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 385
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 386 WQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDV 565
+ I+ IDV T DGY +RV + FT T A+ +Q RAI K+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 566 TNSELREVVNKLI 604
+ E + + +
Sbjct: 143 KECDFDEFIRRCL 155
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 52.4 bits (120), Expect = 9e-06
Identities = 39/131 (29%), Positives = 67/131 (51%)
Frame = +2
Query: 212 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 391
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 392 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTN 571
+ I+AN+DV T DG+V+RV FT K A+ +Q++AI + M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 572 SELREVVNKLI 604
++ + + I
Sbjct: 152 TDFETFMQEAI 162
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +2
Query: 218 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 397
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 398 IEANIDVXTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHTQV 520
IE +DV T DGY LRV + FT + SQ++ A Q+
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIMRQI 147
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 50.8 bits (116), Expect = 3e-05
Identities = 38/131 (29%), Positives = 62/131 (47%)
Frame = +2
Query: 212 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 391
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 392 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTN 571
+ + +V T DGY LRV + FT R+ C + +Q AI K M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 572 SELREVVNKLI 604
S L E++ ++
Sbjct: 149 STLDELIQLMV 159
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 50.4 bits (115), Expect = 4e-05
Identities = 40/131 (30%), Positives = 61/131 (46%)
Frame = +2
Query: 218 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 397
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 398 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 577
I+ +V T+DGY +RV + ++ S KT I KK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 578 LREVVNKLIPD 610
E V +I D
Sbjct: 158 FSEYVKYIISD 168
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 46.4 bits (105), Expect = 6e-04
Identities = 29/95 (30%), Positives = 48/95 (50%)
Frame = +2
Query: 212 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 391
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 392 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKT 496
+ I A ++V T DG+ +RV + T + KT
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/91 (28%), Positives = 50/91 (54%)
Frame = +2
Query: 200 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 379
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 380 KKWQTLIEANIDVXTTDGYVLRVFCIGFTNK 472
++++ I+ IDV T DGY++R+ + T K
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 44.4 bits (100), Expect = 0.002
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +2
Query: 218 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 397
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 398 IEANIDVXTTDGYVLRVFCIGFTNKDS-LSQRK 493
+EA+I V TTD Y +RV + T K + SQ K
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 44.4 bits (100), Expect = 0.002
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = +2
Query: 218 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 397
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 398 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIXKKMCEIITRDVTNS 574
I +D+ T DG+ LRV + T Y H Q I K M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 575 ELREVVNKLIPDSIA 619
E V ++I ++A
Sbjct: 158 TFDEFVQEMIFGNLA 172
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 43.2 bits (97), Expect = 0.006
Identities = 30/129 (23%), Positives = 59/129 (45%)
Frame = +2
Query: 218 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 397
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 398 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 577
+EA I V TTD Y +++ + T K A +Q +AI + M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 578 LREVVNKLI 604
++++ ++
Sbjct: 151 FEQLIDSVV 159
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.017
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 36 GKIKACRRAVKKVLTKKIVDPFTRKDWYDVKA 131
GK K + KK KK++D F++KDWYDVKA
Sbjct: 4 GKNKCFMKGSKKGAKKKVIDQFSKKDWYDVKA 35
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 41.5 bits (93), Expect = 0.017
Identities = 24/93 (25%), Positives = 48/93 (51%)
Frame = +2
Query: 215 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 394
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 395 LIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRK 493
+ +DV T+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 37.9 bits (84), Expect = 0.21
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Frame = +2
Query: 206 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 385
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 386 WQTLIEANIDVXTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRD 562
+ +++ I V L+V FT +A+ +QV+ + KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 563 VTNSELREVVNKLIPDSIA 619
++ V+ ++ ++
Sbjct: 152 AKEADFESFVSAMLKGELS 170
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 36.3 bits (80), Expect = 0.64
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +2
Query: 221 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 397
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 398 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIXKKMCEIITRDVTNSE 577
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 578 L 580
+
Sbjct: 178 I 178
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 35.1 bits (77), Expect = 1.5
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = -2
Query: 462 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 289
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 288 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVALG 181
L + + SV + S R S L F P EA+++A+G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -2
Query: 414 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 250
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 33.9 bits (74), Expect = 3.4
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = -2
Query: 411 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 232
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 231 SKTLPFNPSEAIFVALG-TVDKRGADLPL 148
++ + E +A G T+D+ A + L
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNL 188
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.9 bits (74), Expect = 3.4
Identities = 26/102 (25%), Positives = 50/102 (49%)
Frame = +2
Query: 311 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQR 490
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 491 KTCYAQHTQVRAIXKKMCEIITRDVTNSELREVVNKLIPDSI 616
+ + + + +R++ K + +++ T LR +VN +PDS+
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSL 608
>UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;
Alphaproteobacteria|Rep: FAD linked oxidase domain
protein - Methylobacterium extorquens PA1
Length = 990
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = -3
Query: 329 RAHYVLAHIRRLI*ICGKTFPRQCQLVDQPGKLRKLFPSILPKQFSLXWVRLTSVVPTCL 150
R H V+AH R CG+T+ Q + R+ ++LP F R+ + P+CL
Sbjct: 774 RLHRVIAHEGRRPLCCGRTYLASGQTDRAREEARRTLDTLLP--FVRAGARVVGLEPSCL 831
Query: 149 LLNIERSLDIVP 114
L + L ++P
Sbjct: 832 LTFRDEFLSLLP 843
>UniRef50_A3JY02 Cluster: Putative uncharacterized protein; n=2;
Sagittula stellata E-37|Rep: Putative uncharacterized
protein - Sagittula stellata E-37
Length = 461
Score = 33.5 bits (73), Expect = 4.5
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Frame = -1
Query: 649 MPW-QAFSMSXGNGVRNQLVHHLPEFRVSDVACNDFTHF-LXDCSDL------SVLGVAR 494
+PW Q ++ G+ +L HHL + V+ + L DC+D+ +A
Sbjct: 319 VPWDQEIRLTTHLGIYRRLKHHLQDDLVAALHARAAEGATLGDCADVLGDNPAQTFQIAM 378
Query: 493 LALAQGVLIGETNAEDT*NVSIGCXHINVGFDESLPFFNHPPELIGCEV-HAVEVAE--H 323
LALA G L+ AE GC N+ L P L+ + A+EV E H
Sbjct: 379 LALASGKLLDRRPAEQIAASEEGCDRFNMAMLRRLQTGAPSPGLVSPVIGGAIEVQEETH 438
Query: 322 ITSL 311
T+L
Sbjct: 439 RTAL 442
>UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR
family; n=4; Corynebacterium|Rep: Bacterial regulatory
proteins, tetR family - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 191
Score = 32.7 bits (71), Expect = 7.8
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +2
Query: 344 MDLTTDKLRWMVKKWQTLIEANIDVXTTDGYVLR-VFCIGFTNKDSLSQRKTCYAQHTQV 520
+++ L W K Q LI+A T Y+L V + S+S ++TC A+ +
Sbjct: 37 LNVAPGALYWHFKNKQELIDA------TSRYLLAPVLGRNDEQRASISAQETC-AEMRSL 89
Query: 521 RAIXKKMCEIITRDVTNSELREVVNKLIPDSIAXGHREG 637
K E+I+ ++N +LR+ + LI DS+ + G
Sbjct: 90 MMQTKDGAEVISAALSNQQLRQELESLISDSLKEPNEVG 128
>UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;
n=42; Oryza sativa|Rep: OSIGBa0153E02-OSIGBa0093I20.19
protein - Oryza sativa (Rice)
Length = 1752
Score = 32.7 bits (71), Expect = 7.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 300 PNMCK-DVMCSATSTAWTSQPISSGGWLKNGRL--SSKPTLM*XQPMDTFYVSSALVSPI 470
P CK + WTS P+++ GW NGR+ + PTL Q + ++ A VS +
Sbjct: 1631 PGKCKLHAWLIIQNRVWTSDPLATRGWQNNGRVPPARTPTLGVAQSVKDWWEMLASVSGV 1690
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,783,579
Number of Sequences: 1657284
Number of extensions: 12729590
Number of successful extensions: 34788
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 33708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34767
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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