Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_H19
(634 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 239 5e-62
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 225 5e-58
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 125 6e-53
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 186 5e-46
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 173 4e-42
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 145 9e-34
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 142 6e-33
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 129 5e-29
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 126 3e-28
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 118 1e-25
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 112 6e-24
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 105 1e-21
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 75 2e-12
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 63 6e-09
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 60 3e-08
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 52 9e-06
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 46 6e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 46 0.001
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 43 0.005
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 42 0.012
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 40 0.050
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 38 0.15
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 35 1.9
UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 239 bits (584), Expect = 5e-62
Identities = 109/161 (67%), Positives = 123/161 (76%)
Frame = +2
Query: 152 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAA 331
QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIE D +VCAAYSHELP+YG++VGLTNYAAA
Sbjct: 39 QDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAA 98
Query: 332 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGAR 511
Y TG E+NVEPVD+GP AF C+LDVGLARTTTGAR
Sbjct: 99 YCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGAR 158
Query: 512 VFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
VF AM GAVDGGLN+PHS+KRFP Y A +K FNA+VHRAHI
Sbjct: 159 VFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHI 199
Score = 79.0 bits (186), Expect = 9e-14
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRL 36
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 225 bits (551), Expect = 5e-58
Identities = 102/163 (62%), Positives = 120/163 (73%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
+VF A+ GAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHI 199
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 125 bits (301), Expect(2) = 6e-53
Identities = 57/71 (80%), Positives = 59/71 (83%)
Frame = +2
Query: 422 EYNVEPVDNGPXAFXCYLDVGLARTTTGARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSK 601
EYNVE V+NGP AF CYLDVGL RTTTGA VF AM GAVDGGLN+PHS KRFP YDA SK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 602 KFNAEVHRAHI 634
FNAE HRAHI
Sbjct: 158 TFNAEAHRAHI 168
Score = 105 bits (252), Expect(2) = 6e-53
Identities = 45/53 (84%), Positives = 50/53 (94%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVK 304
+VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIE D I+CAAYSHELPRYGVK
Sbjct: 37 IVQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRL 36
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 186 bits (452), Expect = 5e-46
Identities = 89/162 (54%), Positives = 107/162 (66%)
Frame = +2
Query: 149 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAA 328
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IE D +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 329 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGA 508
AY+TG +YNVE + F LD+GLARTTTG+
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGS 156
Query: 509 RVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
++F M G DGG+NVPHS RF +D SK++NAE HR I
Sbjct: 157 KIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRI 198
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRL 36
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 173 bits (420), Expect = 4e-42
Identities = 78/163 (47%), Positives = 100/163 (61%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
+ QDKNKYN+PKYR +VR +N+DV CQV Y+ + D +CAAYSHELP+YG+K GLTNYA
Sbjct: 46 ITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYA 105
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
A Y+TG +Y+VE D F C+LD GL RT+TG
Sbjct: 106 ATYATGLLCARRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTG 165
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
ARVF A+ GAVDGGL++PH+ KRF YD K + + +I
Sbjct: 166 ARVFAALKGAVDGGLDIPHNEKRFAGYDLQDKSHDPDTLERYI 208
Score = 39.5 bits (88), Expect = 0.066
Identities = 21/33 (63%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +1
Query: 52 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRL 144
V K Y RYQVKF RRR G KTDY AR+RL
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRL 45
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 145 bits (351), Expect = 9e-34
Identities = 73/169 (43%), Positives = 97/169 (57%), Gaps = 6/169 (3%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDK K+ +PKYRL+VR++NKD+ Q+ ++I D +V AAY+HELP +G++ GLTNYA
Sbjct: 60 VLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYA 119
Query: 326 AAYSTG------XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGL 487
AAY+TG + + E D F LDVGL
Sbjct: 120 AAYATGLLLARRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGL 179
Query: 488 ARTTTGARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
ARTTTGARVF + GAVDGG+ VPH RFP Y+ +A+VHR I
Sbjct: 180 ARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRI 228
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/36 (75%), Positives = 34/36 (94%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQM 59
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 142 bits (344), Expect = 6e-33
Identities = 69/168 (41%), Positives = 93/168 (55%), Gaps = 5/168 (2%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R+GV GL +YA
Sbjct: 326 IIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYA 385
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY+TG +NV+ F LD GL RTTTG
Sbjct: 386 AAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTG 445
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXY-----DAXSKKFNAEVHRAHI 634
RVF + GA DGG+N+PHS RFP Y + S K+ E H+A I
Sbjct: 446 NRVFGVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARI 493
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 129
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 129 bits (312), Expect = 5e-29
Identities = 67/166 (40%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
+VQDK+KYN+PKYR +VR +N + CQV Y+ ++ D +V AA S EL R+G+ GLTNYA
Sbjct: 37 IVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYA 96
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY+TG + N++ P F LD+GL R+T G
Sbjct: 97 AAYATGLLLARRTLKTLKMDKFYEGNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLG 151
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXS---KKFNAEVHRAHI 634
RVF A+ GA DGG+++PH+ +RFP + + +K++A VH+ I
Sbjct: 152 NRVFAALKGAADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDRI 197
Score = 63.3 bits (147), Expect = 5e-09
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLACSGQEQ 165
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL +++
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDK 43
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 126 bits (305), Expect = 3e-28
Identities = 73/178 (41%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Frame = +2
Query: 110 KGKLIIMLVNASLVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELP 289
+GK A ++QDKNKYN K R IVR +N + CQ+A S IE D I+ A S EL
Sbjct: 25 EGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELI 84
Query: 290 RYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXA 460
RYG+ VGL NYAAAY+TG E + +
Sbjct: 85 RYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKP 144
Query: 461 FXCYLDVGLARTTTGARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
+LDVG+ RTTTG RVF A+ GA DGGLN+PH RFP +FN E R +I
Sbjct: 145 IKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFP---GSKNEFNPEQLRKNI 199
Score = 65.7 bits (153), Expect = 9e-10
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKAL 36
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 118 bits (284), Expect = 1e-25
Identities = 62/141 (43%), Positives = 79/141 (56%)
Frame = +2
Query: 152 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAA 331
QDK KY KYRL+ R++N V Q+ + + D VC A S ELP+YG+K+GL+NY AA
Sbjct: 38 QDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAA 97
Query: 332 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGAR 511
Y+TG EY + + P F LDVGLARTTTGA+
Sbjct: 98 YATG---LLVARRFLTQMKLADVFKTEITEEYLNDEENRRP--FKVILDVGLARTTTGAK 152
Query: 512 VFXAMXGAVDGGLNVPHSIKR 574
VF M GAVDGGL +PH++ R
Sbjct: 153 VFAVMKGAVDGGLFIPHNVCR 173
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 49 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
K+VKN YF R+Q KF+RRRE KTDY R +L
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQL 35
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 112 bits (270), Expect = 6e-24
Identities = 63/148 (42%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Frame = +2
Query: 200 LSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 379
++NK V CQV S + D + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 380 XXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGARVFXAMXGAVDGGLNVP 559
Y+VE +N F LDVG+ TTG RVF A+ GA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 560 HSIKRFPXYDAXSKK---FNAEVHRAHI 634
HS KRFP Y + ++A+ HR I
Sbjct: 124 HSEKRFPGYSVDEENNGTYDAQAHRDRI 151
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 105 bits (251), Expect = 1e-21
Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Frame = +2
Query: 152 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAA 331
QD N + K+RL+VR++ V CQ+ + ++ D ++ A S EL RYG+ G TNY+AA
Sbjct: 33 QDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAA 92
Query: 332 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPXAFXCYLDVGLARTTTGA 508
Y+TG Y+V + +D A +LD+GLAR+T GA
Sbjct: 93 YATGFLIGRRALTAMSLDEVYRPKEIDGT--YSVTKDIDGEKKAPRVFLDIGLARSTRGA 150
Query: 509 RVFXAMXGAVDGGLNVPHSIKRF 577
RVF A+ GA D GLNVPHS +F
Sbjct: 151 RVFGALKGASDAGLNVPHSAAKF 173
Score = 36.3 bits (80), Expect = 0.61
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 64 KQYFKRYQVKFKRRREGKTDYYARKRL 144
+ Y K +QVK +RRREGKTDY R +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNM 30
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 188 LIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 343
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 66.1 bits (154), Expect = 7e-10
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +2
Query: 482 GLARTTTGARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVH 622
GLARTTTG +VF A+ VD GL++PHS K FP YD+ SK+FNAEV+
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVY 117
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 62.9 bits (146), Expect = 6e-09
Identities = 38/141 (26%), Positives = 63/141 (44%)
Frame = +2
Query: 152 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAA 331
QDK K+ K R+I+R S ++++ Q+ S ++ D I+ ++Y L + K NY +
Sbjct: 39 QDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSKLEYKNLTNNYPFS 98
Query: 332 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGAR 511
Y G YN + N +D+GL R T G +
Sbjct: 99 YLLGYYFGKDLIEKVKQSET-----------YNKK---NYSSKITAIIDIGLKRATIGNK 144
Query: 512 VFXAMXGAVDGGLNVPHSIKR 574
F +M G+VD G+N+PH+ +
Sbjct: 145 SFASMKGSVDSGINIPHNYNK 165
Score = 33.5 bits (73), Expect = 4.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 61 NKQYFKRYQVKFKRRREGKTDYYARKRL 144
N Y R+++K +RRR GKTDY R +L
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKL 36
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +2
Query: 422 EYNVEPVDNGPXAFXCYLDVGLARTTTGARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSK 601
+Y+VE NG F +L+VGL +T+ G VF + A+DG LN+PH+ +RF +K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 602 KFNAEVHRAHI 634
+ +A+VHR I
Sbjct: 102 QLDAKVHRKSI 112
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 52.4 bits (120), Expect = 9e-06
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRL 47
Score = 52.4 bits (120), Expect = 9e-06
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2
Query: 152 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXD 253
QDKNKYNTPKYR +VR +NKD+T Q+ + I D
Sbjct: 50 QDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 473 LDVGLARTTTGARVFXAMXGAVDGGLNVPHSIKRFP 580
LD+GLAR GARVF A+ GAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
Score = 42.7 bits (96), Expect = 0.007
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 185 RLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 343
R++VR +N+ + Q+ +E D + AAYS EL YG + + AAY TG
Sbjct: 34 RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTG 86
Score = 38.3 bits (85), Expect = 0.15
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 79 RYQVKFKRRREGKTDYYARKRLACSG 156
RY V F+RR EGKTDYY R L SG
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSSG 31
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 473 LDVGLARTTTGARVFXAMXGAVDGGLNVPHSIKRFP 580
LDVGLA T+G RVF A+ G VD GL++PH P
Sbjct: 106 LDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 43.2 bits (97), Expect = 0.005
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 473 LDVGLARTTTGARVFXAMXGAVDGGLNVPHSIKRFP 580
LDVGL + G+RVF A+ GA+D G+ +PHS + P
Sbjct: 104 LDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILP 139
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 179 KYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHEL-PRYGVKVGLTNYAAAYSTG 343
K R+ VR+SN+ + Q +RIE D ++ AA+S EL ++G K N AAY TG
Sbjct: 32 KPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 39.5 bits (88), Expect = 0.066
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 79 RYQVKFKRRREGKTDYYARKRLACSGQEQI 168
RY+V +RRREGKT+YY R RL SG+ ++
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLVKSGKPRM 35
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.9 bits (94), Expect = 0.012
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +1
Query: 79 RYQVKFKRRREGKTDYYARKRLACSGQEQI 168
RY+V F+RRREG+T+Y+ R +L SGQ+++
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQDRV 35
Score = 38.7 bits (86), Expect = 0.11
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 473 LDVGLARTTTGARVFXAMXGAVDGGLNVPHSIKRFP 580
LD+GL ++ G+RV+ A+ G VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
Score = 34.3 bits (75), Expect = 2.5
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +2
Query: 185 RLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 343
R++VR S ++V Q+ E D +A S EL +YG N AAY TG
Sbjct: 34 RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 39.9 bits (89), Expect = 0.050
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 473 LDVGLARTTTGARVFXAMXGAVDGGLNVPHS 565
LD+GL T G++VF GA+D GL++PH+
Sbjct: 103 LDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
Score = 36.7 bits (81), Expect = 0.46
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 179 KYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 343
K RL+ R SNK V Q+ D + +A+S +L YG + N +AY TG
Sbjct: 32 KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 36.3 bits (80), Expect = 0.61
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 79 RYQVKFKRRREGKTDYYARKRLACSGQEQI 168
RY+V +RRRE +TDY+ R RL SG+ ++
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLLKSGKPRL 35
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 38.3 bits (85), Expect = 0.15
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 85 QVKFKRRREGKTDYYARKRLACSGQEQI*HT*ISSDCASLQQRCNMP 225
+++F+R +EGKTDYYARKRL + + +T D + QR ++P
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEY-NTPEXDDSSCNXQRYHLP 81
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 34.7 bits (76), Expect = 1.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 473 LDVGLARTTTGARVFXAMXGAVDGGLNVPHSIKRFP 580
LD+G+ + G +++ + GA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1
Query: 82 YQVKFKRRREGKTDYYARKRL 144
Y+V+FKRRREGKT+Y R +L
Sbjct: 7 YKVQFKRRREGKTNYNKRYKL 27
>UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 534
Score = 32.7 bits (71), Expect = 7.5
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -3
Query: 374 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGHXQSESRPPGMLHLCWRDA 195
+F A+ DQ +L H++++ H+ A+H Q Q H Q + P + H A
Sbjct: 120 IFSAMNAAQFDQYGLLSHSVANASHQHHAASH-QHQHHQQPHHQHAAFNPALGHA----A 174
Query: 194 QSDDI 180
Q DDI
Sbjct: 175 QGDDI 179
>UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 503
Score = 32.7 bits (71), Expect = 7.5
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 338 LNMLQHNLSDQPSHHNVATHVNKQRTQYGHXQSESRPP 225
LN LQ +L D PSH T V + Q H Q + PP
Sbjct: 21 LNRLQPSLEDPPSHLQALTKVVMMQHQIPHQQQHALPP 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,264,922
Number of Sequences: 1657284
Number of extensions: 9843080
Number of successful extensions: 22190
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 21549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22174
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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