Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_H19
(634 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 225 8e-59
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 225 8e-59
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 225 8e-59
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 225 8e-59
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 225 8e-59
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 225 8e-59
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 223 3e-58
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 157 3e-38
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 115 1e-25
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 79 1e-14
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 225 bits (551), Expect = 8e-59
Identities = 102/163 (62%), Positives = 120/163 (73%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
+VF A+ GAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHI 199
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 225 bits (551), Expect = 8e-59
Identities = 102/163 (62%), Positives = 120/163 (73%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
+VF A+ GAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHI 199
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 225 bits (551), Expect = 8e-59
Identities = 102/163 (62%), Positives = 120/163 (73%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
+VF A+ GAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHI 199
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 225 bits (551), Expect = 8e-59
Identities = 102/163 (62%), Positives = 120/163 (73%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
+VF A+ GAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHI 199
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 225 bits (551), Expect = 8e-59
Identities = 102/163 (62%), Positives = 120/163 (73%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
+VF A+ GAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHI 199
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 225 bits (551), Expect = 8e-59
Identities = 102/163 (62%), Positives = 120/163 (73%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 44 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 103
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 104 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 163
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
+VF A+ GAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI
Sbjct: 164 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHI 206
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 223 bits (546), Expect = 3e-58
Identities = 101/163 (61%), Positives = 119/163 (73%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIE D IVCA Y+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYA 96
Query: 326 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTG 505
AAY TG EYNVE +D P AF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 506 ARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
+VF A+ GAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHI 199
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 157 bits (381), Expect = 3e-38
Identities = 72/125 (57%), Positives = 86/125 (68%)
Frame = +2
Query: 188 LIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 367
+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 368 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFXCYLDVGLARTTTGARVFXAMXGAVDGG 547
EYNVE +D P AF CYLD GLARTTTG +VF A+ GAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 548 LNVPH 562
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 115 bits (277), Expect = 1e-25
Identities = 48/62 (77%), Positives = 59/62 (95%)
Frame = +2
Query: 146 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYA 325
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 326 AA 331
AA
Sbjct: 97 AA 98
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 144
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 79.4 bits (187), Expect = 1e-14
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 494 TTTGARVFXAMXGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAHI 634
TTTG +VF A+ GAVDGGL++PHS KRFP YD+ SK+FNAEVHR HI
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHI 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,147,579
Number of Sequences: 237096
Number of extensions: 1563554
Number of successful extensions: 2532
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2524
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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