Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_H18
         (435 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     73   1e-13
11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     69   1e-12
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...    67   5e-12
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464...    27   8.7  

>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = +2

Query: 140 MPREIKDIKDFLIKARRKDAKSVKIKXNPENVKFKVRCSRFLYTLAHH 283
           MP++I +IKDFL+ ARRKDA+SV+IK + + VKFKVRCSR+LYTL  H
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRSKDAVKFKVRCSRYLYTLCVH 48



 Score = 36.3 bits (80), Expect = 0.011
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +3

Query: 279 ITDKEKAXKLKQSLPPGLQVKEV 347
           + D +KA KLKQSLPPGL V+EV
Sbjct: 47  VHDTDKANKLKQSLPPGLTVQEV 69


>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 69.3 bits (162), Expect = 1e-12
 Identities = 30/45 (66%), Positives = 39/45 (86%)
 Frame = +2

Query: 140 MPREIKDIKDFLIKARRKDAKSVKIKXNPENVKFKVRCSRFLYTL 274
           MP++I +IKDFL+ ARRKDA+SV+IK   + VKFKVRCS++LYTL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTL 45



 Score = 36.7 bits (81), Expect = 0.008
 Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
 Frame = +3

Query: 264 CTPWLIT----DKEKAXKLKQSLPPGLQVKEV 347
           C+ +L T    D +KA KLKQSLPPGL V+EV
Sbjct: 38  CSKYLYTLCVFDADKANKLKQSLPPGLTVQEV 69


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score = 67.3 bits (157), Expect = 5e-12
 Identities = 29/44 (65%), Positives = 38/44 (86%)
 Frame = +2

Query: 143 PREIKDIKDFLIKARRKDAKSVKIKXNPENVKFKVRCSRFLYTL 274
           P++I +IKDFL+ ARRKDA+SV+IK   + VKFKVRCS++LYTL
Sbjct: 32  PKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTL 75



 Score = 36.7 bits (81), Expect = 0.008
 Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 4/32 (12%)
 Frame = +3

Query: 264 CTPWLIT----DKEKAXKLKQSLPPGLQVKEV 347
           C+ +L T    D +KA KLKQSLPPGL V+EV
Sbjct: 68  CSKYLYTLCVFDADKANKLKQSLPPGLTVQEV 99


>02_05_0844 -
           32144417-32144764,32145588-32145686,32146218-32146410,
           32147049-32147107,32147189-32147263,32147557-32147670,
           32147776-32147895,32148204-32148216,32148421-32148512,
           32149078-32149164,32149254-32149328,32149630-32149680,
           32149852-32149947,32150135-32150221,32150312-32150368,
           32150475-32150600,32150709-32150949,32151028-32151114,
           32151260-32151637,32152847-32153187
          Length = 912

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 222 TLRMSSSRFDAQGSCTPWLITDKEKAXKLKQSL 320
           T RM SS+F+  GSC   LI D+    K  Q+L
Sbjct: 357 TFRMHSSKFERPGSC-DLLICDEAHRLKNDQTL 388


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,333,740
Number of Sequences: 37544
Number of extensions: 107816
Number of successful extensions: 173
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)