Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_H18
         (435 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical pr...    79   1e-15
AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical...    28   3.4  
AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical ...    28   3.4  

>Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical
           protein C06B8.8 protein.
          Length = 70

 Score = 79.0 bits (186), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +2

Query: 140 MPREIKDIKDFLIKARRKDAKSVKIKXNPENVKFKVRCSRFLYTL 274
           MP+EIK+IKDFL+KARRKDAKSVKIK N  N KFKVRC+ +LYTL
Sbjct: 1   MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTL 45



 Score = 44.0 bits (99), Expect = 5e-05
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = +3

Query: 276 LITDKEKAXKLKQSLPPGLQVKEVK 350
           ++ DK+KA KLKQSLPPG+QVKE+K
Sbjct: 46  VVADKDKAEKLKQSLPPGIQVKELK 70


>AL021497-10|CAD56614.1|  490|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13b protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 211 NKEXP*ECQVQGSMLKVPV--HPGSSLTKRRLXNLSRVYLQVSKLKK*SDV 357
           NKE P E QVQG+  +V +   P      RR  +L  +  ++   KK  D+
Sbjct: 253 NKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDAIVSEIDAAKKFIDI 303


>AL021497-9|CAA16397.1|  487|Caenorhabditis elegans Hypothetical
           protein Y51A2D.13a protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 211 NKEXP*ECQVQGSMLKVPV--HPGSSLTKRRLXNLSRVYLQVSKLKK*SDV 357
           NKE P E QVQG+  +V +   P      RR  +L  +  ++   KK  D+
Sbjct: 250 NKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDAIVSEIDAAKKFIDI 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,577,970
Number of Sequences: 27780
Number of extensions: 105121
Number of successful extensions: 195
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)