Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_H15
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 88 4e-18
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 64 4e-11
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 64 4e-11
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 59 2e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 59 2e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 59 2e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 55 3e-08
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 55 3e-08
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 55 3e-08
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.001
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.001
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.004
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.004
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 36 0.013
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.023
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 36 0.023
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 36 0.023
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 35 0.030
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 33 0.093
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 33 0.16
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 33 0.16
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 33 0.16
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 31 0.37
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.65
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.1
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 29 1.5
AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical ... 29 1.5
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 1.5
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 1.5
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 29 2.0
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.6
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 4.6
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 4.6
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 4.6
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 27 6.1
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 27 6.1
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 27 8.0
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 27 8.0
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 87.8 bits (208), Expect = 4e-18
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Frame = +2
Query: 152 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE---------- 301
S CY C TGHF+R+C +GG G C+ C GH++RDC
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGY 94
Query: 302 ----------XADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNCP 424
+CY C +GHI+REC + S +E CY C +TGHI+R+CP
Sbjct: 95 GGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCP 147
Score = 83.0 bits (196), Expect = 1e-16
Identities = 46/145 (31%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Frame = +2
Query: 143 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXAD---- 310
MS CYKC + GH +R C G G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQ 59
Query: 311 --------RCYRCNGTGHIARECAQSPDE------------------PSCYNCNKTGHIA 412
CY C G GH +R+C + E CYNC ++GHI+
Sbjct: 60 RGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHIS 119
Query: 413 RNCPXGGXXSATQTCYNCNKSGHXS 487
R C G + + CY C ++GH S
Sbjct: 120 RECTESG-SAEEKRCYQCQETGHIS 143
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 64.5 bits (150), Expect = 4e-11
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE---XADRCYRCN 328
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 329 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCPXGG-XXSATQTCYNCNKSGH 481
GH A +C Q P P C NC + GH A++C T+ C C + GH
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGH 675
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC------XEXADRCY 319
C C GHFA +C Q V R C C + GHFA+DC E + C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 320 RCNGTGHIARECAQSPDE 373
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 266 NRTGHFARDCXEXADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPXGGXX 439
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 440 SATQTCYNCNKSGH 481
C NC GH
Sbjct: 615 RG--PCRNCGIEGH 626
Score = 31.1 bits (67), Expect = 0.49
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 380 CYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXSA 490
C+NC + GHI++ C C NC + GH ++
Sbjct: 572 CHNCGEEGHISKECDK--PKVPRFPCRNCEQLGHFAS 606
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 64.5 bits (150), Expect = 4e-11
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE---XADRCYRCN 328
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 329 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCPXGG-XXSATQTCYNCNKSGH 481
GH A +C Q P P C NC + GH A++C T+ C C + GH
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGH 675
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC------XEXADRCY 319
C C GHFA +C Q V R C C + GHFA+DC E + C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 320 RCNGTGHIARECAQSPDE 373
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 266 NRTGHFARDCXEXADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPXGGXX 439
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 440 SATQTCYNCNKSGH 481
C NC GH
Sbjct: 615 RG--PCRNCGIEGH 626
Score = 31.1 bits (67), Expect = 0.49
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 380 CYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXSA 490
C+NC + GHI++ C C NC + GH ++
Sbjct: 572 CHNCGEEGHISKECDK--PKVPRFPCRNCEQLGHFAS 606
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +2
Query: 155 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCY 319
VCY C + GH +R+C + G SGF + F F + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 320 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 424
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 272 TGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCP 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CP
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 298
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 272 TGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCP 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CP
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 412
Score = 44.0 bits (99), Expect = 7e-05
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 15/126 (11%)
Frame = +2
Query: 155 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFKCNRTGHFARDCXEX 304
VCY C + GH +R+C + G SGF F T F
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 305 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPXGGXXSATQTCYNCN 469
+ + N G + Q E + C+NC + GH + +CP + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 470 KSGHXS 487
+ GH S
Sbjct: 403 QPGHNS 408
Score = 43.6 bits (98), Expect = 9e-05
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 15/125 (12%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCYRCNG-- 331
C+ C + GH + +C + R+ C+ C + GH +RDC E NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 332 -----------TGHIARECAQSPDE--PSCYNCNKTGHIARNCPXGGXXSATQTCYNCNK 472
G A + + C+NC GH + CP + C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECP-----EPPRGCFNCGE 480
Query: 473 SGHXS 487
GH S
Sbjct: 481 QGHRS 485
Score = 42.7 bits (96), Expect = 2e-04
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 377 SCYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXS 487
+C+NC + GH + +CP + CYNC + GH S
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNS 294
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 15/98 (15%)
Frame = +2
Query: 242 QREKCFKCNRTGHFARDCXEXADR-----CYRCNGTGHIARECAQSPDEPSCYNCNKTGH 406
+ CF C + GH + DC E CY C GH +R+C + N +G
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 407 IARNCPXGGXXSA----------TQTCYNCNKSGHXSA 490
N G +A C+NC GH SA
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSA 466
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +2
Query: 242 QREKCFKCNRTGHFARDCXEXADR-----CYRCNGTGHIARECAQ 361
+ CF C + GH + DC E CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE 301
C+ C + GH + +C + R+ C+ C + GH +RDC E
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPE 299
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +2
Query: 155 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCY 319
VCY C + GH +R+C + G SGF + F F + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 320 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 424
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 272 TGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCP 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CP
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 298
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 272 TGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCP 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CP
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 412
Score = 44.0 bits (99), Expect = 7e-05
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 15/126 (11%)
Frame = +2
Query: 155 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFKCNRTGHFARDCXEX 304
VCY C + GH +R+C + G SGF F T F
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 305 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPXGGXXSATQTCYNCN 469
+ + N G + Q E + C+NC + GH + +CP + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 470 KSGHXS 487
+ GH S
Sbjct: 403 QPGHNS 408
Score = 43.6 bits (98), Expect = 9e-05
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 15/125 (12%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCYRCNG-- 331
C+ C + GH + +C + R+ C+ C + GH +RDC E NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 332 -----------TGHIARECAQSPDE--PSCYNCNKTGHIARNCPXGGXXSATQTCYNCNK 472
G A + + C+NC GH + CP + C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECP-----EPPRGCFNCGE 480
Query: 473 SGHXS 487
GH S
Sbjct: 481 QGHRS 485
Score = 42.7 bits (96), Expect = 2e-04
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 377 SCYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXS 487
+C+NC + GH + +CP + CYNC + GH S
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNS 294
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 15/98 (15%)
Frame = +2
Query: 242 QREKCFKCNRTGHFARDCXEXADR-----CYRCNGTGHIARECAQSPDEPSCYNCNKTGH 406
+ CF C + GH + DC E CY C GH +R+C + N +G
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 407 IARNCPXGGXXSA----------TQTCYNCNKSGHXSA 490
N G +A C+NC GH SA
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSA 466
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +2
Query: 242 QREKCFKCNRTGHFARDCXEXADR-----CYRCNGTGHIARECAQ 361
+ CF C + GH + DC E CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE 301
C+ C + GH + +C + R+ C+ C + GH +RDC E
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPE 299
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +2
Query: 155 VCYKCNRTGHFARECTQG-----GVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCY 319
VCY C + GH +R+C + G SGF + F F + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 320 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 424
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 272 TGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCP 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CP
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 298
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 272 TGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCP 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CP
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 412
Score = 44.0 bits (99), Expect = 7e-05
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 15/126 (11%)
Frame = +2
Query: 155 VCYKCNRTGHFARECTQ--------GGVVSRDSGFNRQRE--KCFKCNRTGHFARDCXEX 304
VCY C + GH +R+C + G SGF F T F
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 305 A---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPXGGXXSATQTCYNCN 469
+ + N G + Q E + C+NC + GH + +CP + CYNC
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 470 KSGHXS 487
+ GH S
Sbjct: 403 QPGHNS 408
Score = 43.6 bits (98), Expect = 9e-05
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 15/125 (12%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCYRCNG-- 331
C+ C + GH + +C + R+ C+ C + GH +RDC E NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 332 -----------TGHIARECAQSPDE--PSCYNCNKTGHIARNCPXGGXXSATQTCYNCNK 472
G A + + C+NC GH + CP + C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECP-----EPPRGCFNCGE 480
Query: 473 SGHXS 487
GH S
Sbjct: 481 QGHRS 485
Score = 42.7 bits (96), Expect = 2e-04
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 377 SCYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXS 487
+C+NC + GH + +CP + CYNC + GH S
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNS 294
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 15/98 (15%)
Frame = +2
Query: 242 QREKCFKCNRTGHFARDCXEXADR-----CYRCNGTGHIARECAQSPDEPSCYNCNKTGH 406
+ CF C + GH + DC E CY C GH +R+C + N +G
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 407 IARNCPXGGXXSA----------TQTCYNCNKSGHXSA 490
N G +A C+NC GH SA
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSA 466
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Frame = +2
Query: 242 QREKCFKCNRTGHFARDCXEXADR-----CYRCNGTGHIARECAQ 361
+ CF C + GH + DC E CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 34.7 bits (76), Expect = 0.040
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXE 301
C+ C + GH + +C + R+ C+ C + GH +RDC E
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPE 299
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Frame = +2
Query: 155 VCYKCNRTGHFARECTQG--------GVVSRDSGF-NRQREKCFKCNRTGHFARDCXEXA 307
VCY C + GH +RECT+ G +GF N F G F
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGF--GGDGGFGGGEERGP 241
Query: 308 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 424
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 44.8 bits (101), Expect = 4e-05
Identities = 30/104 (28%), Positives = 36/104 (34%), Gaps = 17/104 (16%)
Frame = +2
Query: 230 GFNRQREKCFKCNRTGHFARDCXEXADR-----CYRCNGTGHIARECAQ--SPDEPSC-- 382
G + CF C + GH + DC E CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 383 --------YNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXSA 490
N G GG C+NC GH SA
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSA 255
Score = 40.3 bits (90), Expect = 8e-04
Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXAD-RCYRCNGT 334
C+ C + GH + +C + R+ C+ C + GH +R+C E R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 335 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPXGGXXSATQTCYNC 466
G A ++ C+NC GH + CP + C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECP-----EPPRGCFNC 267
Query: 467 NKSGHXS 487
+ GH S
Sbjct: 268 GEQGHRS 274
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Frame = +2
Query: 155 VCYKCNRTGHFARECTQG--------GVVSRDSGF-NRQREKCFKCNRTGHFARDCXEXA 307
VCY C + GH +RECT+ G +GF N F G F
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGF--GGDGGFGGGEERGP 241
Query: 308 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 424
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 44.8 bits (101), Expect = 4e-05
Identities = 30/104 (28%), Positives = 36/104 (34%), Gaps = 17/104 (16%)
Frame = +2
Query: 230 GFNRQREKCFKCNRTGHFARDCXEXADR-----CYRCNGTGHIARECAQ--SPDEPSC-- 382
G + CF C + GH + DC E CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 383 --------YNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXSA 490
N G GG C+NC GH SA
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSA 255
Score = 40.3 bits (90), Expect = 8e-04
Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXAD-RCYRCNGT 334
C+ C + GH + +C + R+ C+ C + GH +R+C E R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 335 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPXGGXXSATQTCYNC 466
G A ++ C+NC GH + CP + C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECP-----EPPRGCFNC 267
Query: 467 NKSGHXS 487
+ GH S
Sbjct: 268 GEQGHRS 274
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Frame = +2
Query: 155 VCYKCNRTGHFARECTQG--------GVVSRDSGF-NRQREKCFKCNRTGHFARDCXEXA 307
VCY C + GH +RECT+ G +GF N F G F
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGF--GGDGGFGGGEERGP 241
Query: 308 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 424
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 44.8 bits (101), Expect = 4e-05
Identities = 30/104 (28%), Positives = 36/104 (34%), Gaps = 17/104 (16%)
Frame = +2
Query: 230 GFNRQREKCFKCNRTGHFARDCXEXADR-----CYRCNGTGHIARECAQ--SPDEPSC-- 382
G + CF C + GH + DC E CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 383 --------YNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXSA 490
N G GG C+NC GH SA
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSA 255
Score = 40.3 bits (90), Expect = 8e-04
Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXAD-RCYRCNGT 334
C+ C + GH + +C + R+ C+ C + GH +R+C E R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 335 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPXGGXXSATQTCYNC 466
G A ++ C+NC GH + CP + C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECP-----EPPRGCFNC 267
Query: 467 NKSGHXS 487
+ GH S
Sbjct: 268 GEQGHRS 274
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 54.8 bits (126), Expect = 4e-08
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Frame = +2
Query: 143 MSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADR--- 313
++ S C+ C GH +C + S D CFKC H +C + +
Sbjct: 226 ITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGFP 278
Query: 314 ---CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCP 424
C+ C GHI+R+C Q+ PD C C H+ R+CP
Sbjct: 279 YATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCP 323
Score = 33.1 bits (72), Expect = 0.12
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 377 SCYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGH 481
+C++C + GH +CP S+ C+ C H
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEH 264
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 149 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADR-CYRC 325
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 628 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 680
Query: 326 NGTGHIARECAQSPDEPS 379
N GHIA C + + S
Sbjct: 681 NEMGHIAWNCPKKNENTS 698
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +2
Query: 248 EKCFKCNRTGHFARDCXEXA-----DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 412
++C C + G C + + +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 413 RNCP 424
NCP
Sbjct: 688 WNCP 691
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 305 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPXGGXXSATQTCYNCNKS 475
+DRC C G C++ S D S C C ++G +C + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 476 GH 481
GH
Sbjct: 684 GH 685
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 149 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADR-CYRC 325
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 531 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 583
Query: 326 NGTGHIARECAQSPDEPS 379
N GHIA C + + S
Sbjct: 584 NEMGHIAWNCPKKNENTS 601
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +2
Query: 248 EKCFKCNRTGHFARDCXEXA-----DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 412
++C C + G C + + +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 413 RNCP 424
NCP
Sbjct: 591 WNCP 594
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 305 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPXGGXXSATQTCYNCNKS 475
+DRC C G C++ S D S C C ++G +C + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 476 GH 481
GH
Sbjct: 587 GH 588
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 149 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADR-CYRC 325
S C C + G C++ S+D+ +KC +C ++G C + +R C+RC
Sbjct: 542 SDRCSDCQQRGWHMFWCSKK---SKDNA----SQKCDECQQSGWHMASCFKLKNRACFRC 594
Query: 326 NGTGHIARECAQSPDEPS 379
N GHIA C + + S
Sbjct: 595 NEMGHIAWNCPKKNENTS 612
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +2
Query: 248 EKCFKCNRTGHFARDCXEXA-----DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 412
++C C + G C + + +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 413 RNCP 424
NCP
Sbjct: 602 WNCP 605
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 305 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPXGGXXSATQTCYNCNKS 475
+DRC C G C++ S D S C C ++G +C + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 476 GH 481
GH
Sbjct: 598 GH 599
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 254 CFKCNRTGHFARDCXEXADRCYRCNGTGHIARECA 358
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.5 bits (73), Expect = 0.093
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 305 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 421
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 377 SCYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGH 481
+C+NC K GH A C + + C NC H
Sbjct: 203 TCFNCKKYGHRATEC-----SAPQRECANCGDPNH 232
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 149 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 295
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 254 CFKCNRTGHFARDCXEXADRCYRCNGTGHIARECA 358
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.5 bits (73), Expect = 0.093
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 305 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 421
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 377 SCYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGH 481
+C+NC K GH A C + + C NC H
Sbjct: 203 TCFNCKKYGHRATEC-----SAPQRECANCGDPNH 232
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 149 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDC 295
S+ C+ C + GH A EC+ QRE C C H A +C
Sbjct: 201 SNTCFNCKKYGHRATECSA-----------PQRE-CANCGDPNHRANEC 237
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 36.3 bits (80), Expect = 0.013
Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Frame = -1
Query: 503 CVGTVRXCGRTCCSYSRFGXQXPAPXRDSSVRCG-PSCCSCNMTARPGSVRTRALCAQCR 327
C G + CG C S G Q P CG P C C V T C C+
Sbjct: 59 CCGGMSGCG--CGSMGMCG-QTCCPSAPPPCSCGTPGCMQCVQQTVLVPVTTTTCCKCCQ 115
Query: 326 YICSNGQPXXCNPSQSVLCGCT 261
+C+N C CGCT
Sbjct: 116 PVCTNA----CTNGGGCSCGCT 133
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 36.3 bits (80), Expect = 0.013
Identities = 22/90 (24%), Positives = 33/90 (36%)
Frame = +2
Query: 161 YKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCYRCNGTGH 340
+ C R H + +C + V+ F + K CN H C D + C G H
Sbjct: 386 HNCERICH-SGDCGECTVILEQDCFCGKTPKEVSCNPCAHEKYSCGSECDGMFSC-GIHH 443
Query: 341 IARECAQSPDEPSCYNCNKTGHIARNCPXG 430
++C + C C + R CP G
Sbjct: 444 CTKKC----HDKECGECETGANRIRTCPCG 469
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.023
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Frame = +2
Query: 254 CFKCNRTGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 418
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 419 CPXGGXXSATQTCY 460
C G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
Score = 31.9 bits (69), Expect = 0.28
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 143 MSSSVCYKCNRTGHFARECTQGGV 214
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/66 (24%), Positives = 25/66 (37%)
Frame = +2
Query: 284 ARDCXEXADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPXGGXXSATQTCYN 463
A+ A C+ C+ GH A C P + N + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 464 CNKSGH 481
C + GH
Sbjct: 255 CGEKGH 260
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 35.5 bits (78), Expect = 0.023
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 275 GHFARDCXEXADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC 421
G F + RC C H + EC +P ++ C NC GHI+++C
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +2
Query: 380 CYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXS 487
C NC H + CP + C NC GH S
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHIS 465
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 35.5 bits (78), Expect = 0.023
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 275 GHFARDCXEXADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC 421
G F + RC C H + EC +P ++ C NC GHI+++C
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +2
Query: 380 CYNCNKTGHIARNCPXGGXXSATQTCYNCNKSGHXS 487
C NC H + CP + C NC GH S
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHIS 465
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 35.1 bits (77), Expect = 0.030
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 377 SCYNCNKTGHIARNCPXG 430
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.28
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 143 MSSSVCYKCNRTGHFARECTQG 208
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 305 ADR-CYRCNGTGHIAREC 355
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 254 CFKCNRTGHFARDCXEXADRCYRCNGTG 337
C+KC + GH +R+C R G G
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGG 33
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 33.5 bits (73), Expect = 0.093
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 314 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPXGGXXSATQTCYNCNKSG 478
CY+C GH++++C QS N KT H N G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 30.7 bits (66), Expect = 0.65
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 374 PSCYNCNKTGHIARNCPXGGXXS 442
P CY C GH++++CP S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 250
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 311 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCP 424
RC+RC H A+ C D CY C H++ CP
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICP 151
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 311 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCP 424
RC+RC H A+ C D CY C H++ CP
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICP 182
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 311 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCP 424
RC+RC H A+ C D CY C H++ CP
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICP 182
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 311 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCP 424
RC+RC H A+ C D CY C H++ CP
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICP 182
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +2
Query: 152 SVCYKCNRTGHFAR--ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCYRC 325
S C C+ T H R EC R+ CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 326 NGTGH 340
G H
Sbjct: 371 KGNHH 375
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 30.7 bits (66), Expect = 0.65
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +2
Query: 341 IARECAQ--SPDEPSCYNCNKTGHIARNCP 424
+ R+C Q +P + C+ C++ GH +CP
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCP 1371
Score = 30.7 bits (66), Expect = 0.65
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVV--SRDSGFNRQREKCFKCNRTGHFARDCXEXADR 313
C++C+R GHF C Q + +R + ++ N +G ++ E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/81 (29%), Positives = 33/81 (40%)
Frame = +2
Query: 191 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCYRCNGTGHIARECAQSPD 370
R+C QG + +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGSAPT-----DRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 371 EPSCYNCNKTGHIARNCPXGG 433
S Y N +G +N GG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 299 EXADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 406
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 265
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 380 CYNCNKTGHIARNC 421
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Frame = +2
Query: 176 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CXEXADRCYRCNGTGH 340
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 341 IARECAQSPDEPSCYNC--NKTGHIARNCPXG--GXXSATQTCYNCNKS 475
+ + P+ CY C N G +C G + C +C S
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECS 1993
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Frame = +2
Query: 176 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CXEXADRCYRCNGTGH 340
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 341 IARECAQSPDEPSCYNC--NKTGHIARNCPXG--GXXSATQTCYNCNKS 475
+ + P+ CY C N G +C G + C +C S
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECS 1993
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +2
Query: 149 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADR 313
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Frame = +2
Query: 314 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCP 424
C C G C+ +P P C+ C + GHI+ CP
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
>AC024838-4|AAF60819.1| 99|Caenorhabditis elegans Hypothetical
protein Y59E9AL.5 protein.
Length = 99
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -1
Query: 401 PSCCSCNMTARPGSVRTRAL----CAQCRYICSNGQPXXCNPSQSVLCGCT 261
P+CC+C M + S T+ C C S + C+P S C CT
Sbjct: 49 PTCCACWMRRKKESTTTKVCVQDDCTTCS-CTSASRCSRCSPCCSGCCSCT 98
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Frame = +2
Query: 176 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CXEXADRCYRCNGTGH 340
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 341 IARECAQSPDEPSCYNC--NKTGHIARNCPXG--GXXSATQTCYNCNKS 475
+ + P+ CY C N G +C G + C +C S
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECS 1993
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.5 bits (63), Expect = 1.5
Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Frame = +2
Query: 176 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CXEXADRCYRCNGTGH 340
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 341 IARECAQSPDEPSCYNC--NKTGHIARNCPXG--GXXSATQTCYNCNKS 475
+ + P+ CY C N G +C G + C +C S
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECS 1993
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -1
Query: 407 CGPSCCSCNMTARPGSVRTRALCAQCRYICSNGQPXXCNPSQSVLCGC 264
C P CC C RP T C C+ +P C CGC
Sbjct: 69 CRPRCCCC---CRPKCCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCGC 113
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Frame = +2
Query: 191 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCYRCNGTGHIARECAQSPD 370
R C Q + + GF K C+ G DC + + +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 371 E----PSCYNCNKTGH 406
P C C H
Sbjct: 882 GFWGFPECRTCQCNDH 897
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +2
Query: 284 ARDCXEXAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCP 424
A+ C D + Y+ GH R+C D P Y C K G I +NCP
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCP 88
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = -1
Query: 482 CGRTCCSYSRFGXQXPAPXRDSSVRCGPSCCSCNMTARPGSVRTRALC-AQCRYICSN 312
C TC + P P C PSC P V+ +LC QCR +C+N
Sbjct: 241 CLPTCIQQIQISVPLPPPAPRCDSMCMPSC-------SPSCVQQYSLCPQQCRPMCTN 291
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 263 CNRTGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPSCYNCNKTG 403
CN TG DC + + +C C G ++C Q PS +N G
Sbjct: 990 CNDTGSIGSDCDQVSGQC-NCK-QGVFGKQCDQC--RPSYFNFTDAG 1032
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 27.9 bits (59), Expect = 4.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2
Query: 380 CYNCNKTGHIARNCP 424
C++C + GHI+R CP
Sbjct: 170 CFHCQEHGHISRMCP 184
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 263 CNRTGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPSCYNCNKTG 403
CN TG DC + + +C C G ++C Q PS +N G
Sbjct: 990 CNDTGSIGSDCDQVSGQC-NCK-QGVFGKQCDQC--RPSYFNFTDAG 1032
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 263 CNRTGHFARDCXEXADRCYRCNGTGHIARECAQSPDEPSCYNCNKTG 403
CN TG DC + + +C C G ++C Q PS +N G
Sbjct: 990 CNDTGSIGSDCDQVSGQC-NCK-QGVFGKQCDQC--RPSYFNFTDAG 1032
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -1
Query: 410 RCGPSCCSCNMTARPGSVRTRALCA-QCRYICSNGQPXXCNPSQSVLCGC 264
+C C T S + C+ C C+ C P Q+ CGC
Sbjct: 263 QCQQQCQQQCQTRTTASQQCAPACSTSCNQSCNQPAQMACQPMQNSQCGC 312
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +2
Query: 158 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCXEXADRCYRCN-GT 334
CY C + GH A EC + D N +R+ + + R D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 335 GHIARECAQSPDEPS 379
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 470 CCSYSRFGXQXPAPXRDSSVRCGPSCCSCNMTARPGSVRTRALCAQ 333
C S+ Q AP + + C P CC C+ A+PG A A+
Sbjct: 17 CFPTSQRSYQYGAPTQQFAA-CTPQCCGCSQ-AQPGPQPAAAAAAR 60
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/50 (26%), Positives = 17/50 (34%)
Frame = +2
Query: 323 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPXGGXXSATQTCYNCNK 472
C I A +P E C NK + R C G + C+K
Sbjct: 77 CQSACGIPHVLASNPTEEVCEKWNKCDDVKRQCAAAGGNYYAGANFQCSK 126
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 248 EKCFKCNRTGH-FARDCXEXADRCYRCNGTGHIARECAQSPDEPSCYNCNK-TGHIARNC 421
+ C KC H + C + + + C+G +CA DE C +C + +G C
Sbjct: 249 KNCSKCQNNAHKCGKQCIKAS---HVCDGVA----QCADGSDEQQC-DCQRCSGTDKALC 300
Query: 422 PXGGXXSATQTC 457
G TQ C
Sbjct: 301 DDGTCIMRTQVC 312
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,937,985
Number of Sequences: 27780
Number of extensions: 216574
Number of successful extensions: 1026
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -