Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_H13
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 359 2e-98
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 343 3e-93
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 280 2e-74
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 165 8e-40
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 163 2e-39
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 158 1e-37
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 150 3e-35
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 149 8e-35
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 149 8e-35
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 145 7e-34
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 144 1e-33
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 139 6e-32
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 130 4e-29
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 122 1e-26
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 119 5e-26
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 113 3e-24
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 111 2e-23
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 107 2e-22
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 81 3e-14
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 79 9e-14
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 78 2e-13
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 77 5e-13
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 74 3e-12
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 72 1e-11
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 71 2e-11
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 71 2e-11
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 68 2e-10
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 63 6e-09
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 62 1e-08
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 62 1e-08
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 62 1e-08
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 59 8e-08
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 58 1e-07
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 58 2e-07
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 58 2e-07
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 56 6e-07
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 56 1e-06
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 55 2e-06
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 54 3e-06
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 53 5e-06
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 52 1e-05
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 48 2e-04
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 48 2e-04
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 47 5e-04
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 46 6e-04
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 46 8e-04
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 45 0.001
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 45 0.001
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 44 0.002
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 43 0.006
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.007
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 42 0.010
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 42 0.010
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 42 0.013
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 41 0.023
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 41 0.023
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 40 0.039
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 40 0.039
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 40 0.052
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.069
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 39 0.091
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 38 0.16
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 38 0.21
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 37 0.37
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 37 0.49
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 36 0.64
UniRef50_Q02CU7 Cluster: Tetratricopeptide TPR_2 repeat protein;... 34 3.4
UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomon... 33 6.0
UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11; Ar... 33 6.0
UniRef50_A6R0K7 Cluster: Predicted protein; n=2; Pezizomycotina|... 33 7.9
UniRef50_Q9UTS5 Cluster: Zinc finger protein zas1; n=3; Schizosa... 33 7.9
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 359 bits (884), Expect = 2e-98
Identities = 166/204 (81%), Positives = 181/204 (88%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIRAQRKGAGSVF +H K RKGA KLRSL +AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 221 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKM 400
VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL+ GNVMP+ MPEGTI+CNLE K
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 401 GDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPIL 580
GD GRLAR SGN+ATVI HN D K+T VKLPSGAKKV+PS+NR MVGIVAGGGRID PIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 581 KAGXAYHKYKVKRNCWPYVRGVAM 652
KAG AYHKYKVKRN WP VRGVAM
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVAM 204
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 343 bits (842), Expect = 3e-93
Identities = 157/204 (76%), Positives = 176/204 (86%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKM 400
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L GNV+PVG MPEGTIVC LE K
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 401 GDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPIL 580
GD G+LARASGN+ATVI HNP+ K+T VKLPSG+KKV+ S+NR +VG+VAGGGRID PIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 581 KAGXAYHKYKVKRNCWPYVRGVAM 652
KAG AYHKYK KRNCWP VRGVAM
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAM 204
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 280 bits (687), Expect = 2e-74
Identities = 136/204 (66%), Positives = 156/204 (76%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIR+QRKG GSVF +HTK RKG LR++ +AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 221 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKM 400
V FRDPYK+K R E FIA EG+YTGQF+YCGKKA L+
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIYCGKKANLQI---------------------- 98
Query: 401 GDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPIL 580
G+LARASGN+ATVI HNPD K++ VKLPSG+KKV+PS+NR +VGIVAGGGRID P+L
Sbjct: 99 --RGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPML 156
Query: 581 KAGXAYHKYKVKRNCWPYVRGVAM 652
KAG AYHKYK KRNCWP VRGVAM
Sbjct: 157 KAGRAYHKYKAKRNCWPKVRGVAM 180
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 165 bits (401), Expect = 8e-40
Identities = 91/205 (44%), Positives = 123/205 (60%), Gaps = 1/205 (0%)
Frame = +2
Query: 41 MGRVIRAQRKGAGS-VFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLA 217
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 218 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXK 397
V D +F L A EG+Y GQ + G A E GN++P+G +PEGT V N+E +
Sbjct: 57 RVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELR 111
Query: 398 MGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPI 577
GD G+LAR +G++A V+G +T ++LPSG K +P+ +R +GI AG GRI+ PI
Sbjct: 112 PGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPI 169
Query: 578 LKAGXAYHKYKVKRNCWPYVRGVAM 652
+KAG AYHK+KVK WP VRGVAM
Sbjct: 170 MKAGFAYHKWKVKARKWPRVRGVAM 194
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 163 bits (397), Expect = 2e-39
Identities = 75/125 (60%), Positives = 95/125 (76%)
Frame = +2
Query: 131 SLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYC 310
SL +H + +G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YC
Sbjct: 23 SLVLVLKH-HSRGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYC 81
Query: 311 GKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKL 490
G KA+L GNV+P+G PEGT+VCN+E K GD G +ARASGN+ATVI HN D + T ++L
Sbjct: 82 GSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRL 141
Query: 491 PSGAK 505
PSGAK
Sbjct: 142 PSGAK 146
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 158 bits (383), Expect = 1e-37
Identities = 89/205 (43%), Positives = 119/205 (58%), Gaps = 1/205 (0%)
Frame = +2
Query: 41 MGRVIRAQRKG-AGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLA 217
MG+ I QR+G GS F S + R G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 218 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXK 397
+ + +F A EGLY GQ V GK A+ + GN+M +G +PEGT++ N+E +
Sbjct: 57 KIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKR 111
Query: 398 MGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPI 577
GD G+ ARA G +A VIG P+ +T ++LPSG + S R VGIVAGGGRI+ P
Sbjct: 112 AGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPF 171
Query: 578 LKAGXAYHKYKVKRNCWPYVRGVAM 652
LKAG YH+ + K +P VRG AM
Sbjct: 172 LKAGKKYHRARAKAWKYPTVRGKAM 196
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 150 bits (363), Expect = 3e-35
Identities = 78/205 (38%), Positives = 115/205 (56%), Gaps = 1/205 (0%)
Frame = +2
Query: 41 MGRVIRAQRKGAGS-VFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLA 217
MG+ IR QR G G + + + +G + R E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 218 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXK 397
V F D + L + PEG G + CG A ++ GN +P+ +PEG + N+E +
Sbjct: 61 RVRFEDG-----EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQ 115
Query: 398 MGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPI 577
GD G+ ARA G +AT+I H D RT V+LPSG + R +G+++GGG+ + P
Sbjct: 116 PGDGGKFARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGGGKREKPF 173
Query: 578 LKAGXAYHKYKVKRNCWPYVRGVAM 652
+KAG Y+ + K WP VRGVAM
Sbjct: 174 VKAGKKYYHMRSKGGKWPKVRGVAM 198
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 149 bits (360), Expect = 8e-35
Identities = 71/110 (64%), Positives = 84/110 (76%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MGRVIRAQRK AGSVF SHT RKG K RSL + ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 221 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEG 370
V FR P++FK +KELF+ E +YCGKKATL GNV+P+ ++PEG
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEG 110
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 149 bits (360), Expect = 8e-35
Identities = 85/205 (41%), Positives = 118/205 (57%), Gaps = 1/205 (0%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSV-FVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLA 217
MG+ + QR G G + F S + R G K+ ++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNI-----EGEHIGKVIDIVHNPGTNAPLA 55
Query: 218 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXK 397
++ D KF + +GL GQ + GK A + GN++ VG +PEGTI+ N+E
Sbjct: 56 LIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKT 110
Query: 398 MGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPI 577
GD G+ AR++G + V+G D + VKL S + S+ R +VG+VAGGG + P+
Sbjct: 111 RGDGGKFARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPL 168
Query: 578 LKAGXAYHKYKVKRNCWPYVRGVAM 652
LKAG Y KYKVK WP+VRGVAM
Sbjct: 169 LKAGNNYWKYKVKAKKWPHVRGVAM 193
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 145 bits (352), Expect = 7e-34
Identities = 76/200 (38%), Positives = 111/200 (55%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MG++I AQRKG + R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 221 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKM 400
+ F FK EL+IA E LY + + CG +A GNV+P+ +P G VCN+E K
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKE 146
Query: 401 GDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPIL 580
GD G+LAR++G F V+ H+ T +KLPS K+L S R +G+VAGGG+ + P+L
Sbjct: 147 GDGGKLARSAGAFVGVLSHSKYNNVTKLKLPSKKIKILSSFCRATIGVVAGGGKYEKPLL 206
Query: 581 KAGXAYHKYKVKRNCWPYVR 640
KAG Y+K+K +P V+
Sbjct: 207 KAGKNYYKFKSLNKKYPIVK 226
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 144 bits (350), Expect = 1e-33
Identities = 84/205 (40%), Positives = 115/205 (56%), Gaps = 1/205 (0%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MG+ + +Q +G G+ K LR E ++G V I HDP R AP+A
Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRHPRVDENSS-LRGEVVGIEHDPARSAPIAK 58
Query: 221 VHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXK 397
V F+ +ELF+ A EG+ G + CG A ++ GN++P+G +PEG +CN+E K
Sbjct: 59 V------AFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESK 112
Query: 398 MGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPI 577
D G+ R+SG +ATV+ H +A RT V +PSG K L R +VGIVAG GR+D P
Sbjct: 113 PNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPW 170
Query: 578 LKAGXAYHKYKVKRNCWPYVRGVAM 652
LKAG YHK K + +P V VAM
Sbjct: 171 LKAGKKYHKMKTRAAKYPRVSAVAM 195
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 139 bits (336), Expect = 6e-32
Identities = 80/205 (39%), Positives = 117/205 (57%), Gaps = 1/205 (0%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAP-KLRSLXYAERHGYIKGVVKDIIHDPGRGAPLA 217
MG+ +R QR G G+ + + AP + S + +G V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
Query: 218 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXK 397
+ + F A EG+YTGQ V G A GN++P+ A+PEGT + N+E +
Sbjct: 61 HIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIR 115
Query: 398 MGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPI 577
GD G+LAR+ G +A ++G + ++ ++LPSG K + + R +GI AG GR + P+
Sbjct: 116 PGDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARATIGIAAGAGRDEKPL 173
Query: 578 LKAGXAYHKYKVKRNCWPYVRGVAM 652
LKAG AY+K+K K WP VRGVAM
Sbjct: 174 LKAGNAYYKWKAKAKKWPVVRGVAM 198
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 130 bits (313), Expect = 4e-29
Identities = 64/163 (39%), Positives = 99/163 (60%)
Frame = +2
Query: 164 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNV 343
+G V DI+H+ RGAP+A++ F++ + A EG+YTGQ + G A ++ GN+
Sbjct: 34 EGEVIDIVHERSRGAPVAIISFKED------DCMVPASEGMYTGQKILIGDDAPIDIGNI 87
Query: 344 MPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSS 523
+ +PEG V ++E GD G A +G+++ V+ H + T +K+PSG K + S
Sbjct: 88 TKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSE 147
Query: 524 NRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
R +VG+VAGGG D P+LKA A++K K + + +P VRGVAM
Sbjct: 148 CRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAM 190
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 122 bits (293), Expect = 1e-26
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 2/205 (0%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXY--AERHGYIKGVVKDIIHDPGRGAPL 214
MG+ +R+G G T K K + +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 215 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEX 394
A V F D A G G+ + G K+ +E GNV+ + +P+GTIVCN+E
Sbjct: 58 AKVRFEDG-----SVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEK 112
Query: 395 KMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXP 574
GD G + +++G ATV H + VKLPSG L NR M+G +AGGG + P
Sbjct: 113 HFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPKNRAMIGTLAGGGASERP 170
Query: 575 ILKAGXAYHKYKVKRNCWPYVRGVA 649
+ AG + +K K +P VRGVA
Sbjct: 171 FMSAGGKWRNFKAKGKKYPIVRGVA 195
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 119 bits (287), Expect = 5e-26
Identities = 76/204 (37%), Positives = 110/204 (53%), Gaps = 2/204 (0%)
Frame = +2
Query: 41 MGRV-IRAQRKGAGS-VFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPL 214
MG+V + QR+G GS F S T G K+ + G + ++KD IH APL
Sbjct: 1 MGKVRLLVQRRGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHY----APL 56
Query: 215 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEX 394
VV + + + L AP G+ G VY GK+A G++ P+ +PEGT + LE
Sbjct: 57 MVVKWENG-----AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLEN 111
Query: 395 KMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXP 574
GD G+L RASG+FA ++ D + V+LPSG K L ++ R ++G++AGGGR + P
Sbjct: 112 NPGDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKP 169
Query: 575 ILKAGXAYHKYKVKRNCWPYVRGV 646
+KAG Y+ + WP V GV
Sbjct: 170 FVKAGNKYYWASSRNRHWPVVNGV 193
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 113 bits (273), Expect = 3e-24
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 1/204 (0%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSV-FVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLA 217
MG+ +R+G G + F + T + K + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 218 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXK 397
+ F D L G G + G K+ + GNV+ V +P+GT VCN+E
Sbjct: 58 KIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKH 112
Query: 398 MGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPI 577
GD G + +++G ATV H +KLPSG L NR MVG +AGGG + P
Sbjct: 113 YGDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPKNRAMVGTLAGGGVSERPF 170
Query: 578 LKAGXAYHKYKVKRNCWPYVRGVA 649
+ AG + +++ K +P VRGVA
Sbjct: 171 MSAGGKWRRFRSKGRKYPIVRGVA 194
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 111 bits (266), Expect = 2e-23
Identities = 79/206 (38%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 220
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL-- 51
Query: 221 VHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXK 397
+ D T K+++ IA G Y GQ + G T+ G + +P+G+ V N+E
Sbjct: 52 LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESS 107
Query: 398 MGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPI 577
GD G R++G FA V+ H R +KLPSG+ + R VG+VA G ID PI
Sbjct: 108 PGDGGEFCRSAGTFALVVSH---GSRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPI 164
Query: 578 LKAGXAYHKYKVKRNCWPY-VRGVAM 652
LKAG H + K PY VRGVAM
Sbjct: 165 LKAGTHVHYLRSKAK-RPYTVRGVAM 189
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 107 bits (257), Expect = 2e-22
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = +2
Query: 53 IRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 232
IR+QRKGAG VF +HTK RKGA +LR + +AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 233 DPYKFKTRK 259
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 80.6 bits (190), Expect = 3e-14
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 3/201 (1%)
Frame = +2
Query: 59 AQRKGAGSVFVSHTKXRKGAPK--LRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 232
A R G + V H R G K R + + + VK I +DP R A +A++ +
Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97
Query: 233 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXG 412
D K +AP+GL G V G +A ++ GN +P+ +P GT++ N+E K G G
Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGG 152
Query: 413 RLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGX 592
+LAR++G A ++G + K V+L SG +++ ++R +G V G ++ +G
Sbjct: 153 QLARSAGTSAQLLG--KEGKYAIVRLSSGEVRLVLLTSRATIGTV---GNEQHELINSGK 207
Query: 593 AYH-KYKVKRNCWPYVRGVAM 652
A +++ KR P VRG M
Sbjct: 208 AGRTRWQGKR---PTVRGSVM 225
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 79.0 bits (186), Expect = 9e-14
Identities = 53/175 (30%), Positives = 91/175 (52%)
Frame = +2
Query: 128 RSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 307
R + + R + G V+ + +DP R A +A++ + D +AP+ L G V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 308 CGKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVK 487
G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D ++
Sbjct: 118 AGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILR 175
Query: 488 LPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
L SG ++++ + VG V+ + KAG + ++ KR P+VRGVAM
Sbjct: 176 LNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSV--WRGKR---PHVRGVAM 225
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 78.2 bits (184), Expect = 2e-13
Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Frame = +2
Query: 68 KGAGSVFVSHTKXRKGAPK--LRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 241
KG + + + R G K R + + I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 242 KFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLA 421
K + P G G + G + ++ GN +P+ MP GT + N+E +G G+LA
Sbjct: 98 ----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 153
Query: 422 RASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYH 601
RA+G A +I + K +KLPSG +++ + VG V G + +AG
Sbjct: 154 RAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKC- 210
Query: 602 KYKVKRNCWPYVRGVAM 652
+ KR P VRGV M
Sbjct: 211 -WLGKR---PVVRGVVM 223
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVK 178
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 73.7 bits (173), Expect = 3e-12
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Frame = +2
Query: 56 RAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 235
+A R G + H K K R + + + G + I +DP R A + +V++ D
Sbjct: 41 KAGRNNRGLITTRH-KGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLD 99
Query: 236 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGR 415
K R LF +G+ G + + A ++ GN P+ +PEGT++ N+E K G G+
Sbjct: 100 GEK---RYILFA--KGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQ 154
Query: 416 LARASGNFATVIGHNPDAKRTXVKLPSG-AKKVL 514
+AR++G ++G + D K ++L SG +KVL
Sbjct: 155 MARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVL 188
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 71.7 bits (168), Expect = 1e-11
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Frame = +2
Query: 65 RKGAGSVFVSHTKXRKGAPKLRSLXYAERH-GYIKGVVKDIIHDPGRGAPLAVVHFRDPY 241
R G + V H R K R + + H I+ VK I +DP R ++++ + +
Sbjct: 47 RNNQGKITVRHQGGRNKR-KYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANG- 104
Query: 242 KFKTRKELFIAPEGLYTGQFVYCGKKAT-LEXGNVMPVGAMPEGTIVCNLEXKMGDXGRL 418
K I+P+G+ G + + ++ G MP+ +PEGT V N+E G++
Sbjct: 105 ----AKSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQI 160
Query: 419 ARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAY 598
AR++G++A ++G + K ++L SG + R VG+V+ I KAG
Sbjct: 161 ARSAGSYARILGQDETGKYVILQLLSGETRKFLKECRATVGVVSNLDHNLVVIGKAGRNR 220
Query: 599 HKYKVKRNCWPYVRGVAM 652
H R P VRG AM
Sbjct: 221 H-----RGIRPTVRGSAM 233
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 71.3 bits (167), Expect = 2e-11
Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Frame = +2
Query: 113 GAPKL-RSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLY 289
G KL R + + + V I +DP R A + ++H+ D K I PEGL
Sbjct: 73 GHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYADG-----EKRYIIWPEGLK 127
Query: 290 TGQFVY--------CGKKAT-LEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFA 442
G V GK ++ GN MP+ +PEGTIV N+E G G++ARA+G +A
Sbjct: 128 VGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWA 187
Query: 443 TVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRN 622
V+G + V++PSG +++ VG V G + ++K G A + +
Sbjct: 188 QVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRV---GLAEHELVKLGKA---GRARWL 241
Query: 623 CW-PYVRGVAM 652
W P+ RG AM
Sbjct: 242 GWRPHTRGTAM 252
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 70.9 bits (166), Expect = 2e-11
Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Frame = +2
Query: 56 RAQRKGAGSVFVSHTKXRKGAPKL-RSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 232
R R AG + V H G +L R + + ++G ++ + +DP R A +A+V
Sbjct: 65 RGGRNNAGRITVWHKGG--GHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD-- 120
Query: 233 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXG 412
Y+ +AP G G + G ++ ++ GN +P+ +P T + N+E G G
Sbjct: 121 --YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGG 178
Query: 413 RLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKA 586
+L R++G+ AT++ D V+LPSG ++++ + +G+++ G + I KA
Sbjct: 179 QLCRSAGSAATLVKKADDGGYCVVRLPSGEQRLVLENCMATIGMLSNRGHQNRNIGKA 236
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 67.7 bits (158), Expect = 2e-10
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = +2
Query: 269 IAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATV 448
+A L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +
Sbjct: 199 LASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQL 258
Query: 449 I-GHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNC 625
I HN K ++LPSG K P +GIV+ + + KAG + ++ +R
Sbjct: 259 IKKHN---KYAILRLPSGELKSFPLQCMATIGIVSNLNHFNTDLKKAGAS--RWLGRR-- 311
Query: 626 WPYVRGVAM 652
P VRGVAM
Sbjct: 312 -PTVRGVAM 319
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 62.9 bits (146), Expect = 6e-09
Identities = 39/106 (36%), Positives = 57/106 (53%)
Frame = +2
Query: 335 GNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVL 514
GN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K++
Sbjct: 360 GNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKLI 419
Query: 515 PSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
S R +GIV+ KAG + ++ +R P VRGVAM
Sbjct: 420 DSRCRATIGIVSNLNHGKRKFNKAGQS--RWLGRR---PIVRGVAM 460
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/109 (31%), Positives = 59/109 (54%)
Frame = +2
Query: 326 LEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAK 505
++ GN +P+ +P G+I+ N+ G G+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 506 KVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
+ + + +G+V+ KAG + H+ K P VRGVAM
Sbjct: 272 RYVHMNCHATLGVVSNKEHQAISWGKAGRSRHRGK-----RPMVRGVAM 315
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 62.1 bits (144), Expect = 1e-08
Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Frame = +2
Query: 65 RKGAGSVFVSHTKXRKGAPK--LRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 238
R +G V V H R G K +R + +A R VV+ I HDPGR A +A+V ++
Sbjct: 108 RNNSGRVTVRH---RGGGHKRRIRMVDFA-RDAPGPHVVERIEHDPGRSAHIALVRSQET 163
Query: 239 YKFKTRKELFIAPEGLYTGQFVYC-------------------GKKA--TLEXGNVMPVG 355
K +A EG+ G V+ G A T GN +P+
Sbjct: 164 KKLS----YILAAEGMRAGDVVHSYMSGIPEELWKSMGGTVDPGVLAARTAWRGNCLPLH 219
Query: 356 AMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGM 535
MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 220 MMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLIHKDCCAT 279
Query: 536 VGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
VG+ + + KAG + N P VRG+AM
Sbjct: 280 VGVASNPNHQYRQLGKAGRSRW-----LNIRPTVRGLAM 313
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 62.1 bits (144), Expect = 1e-08
Identities = 45/160 (28%), Positives = 79/160 (49%)
Frame = +2
Query: 173 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPV 352
V+ I +DP R A +A+V +RD + +AP GL G + G+ A ++ GN +P+
Sbjct: 84 VERIEYDPNRTAYIALVLYRDG-----ERRYIVAPAGLSAGSEIVAGEFAAIKVGNSLPL 138
Query: 353 GAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRG 532
+P GT+V +E K G + AR++G ++ + + +++ SG + + + +
Sbjct: 139 RNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVA--KEGEYATLRMRSGEMRKVLADCKA 196
Query: 533 MVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
+G V+ + KAG + R P VRGVAM
Sbjct: 197 TIGEVSNNEHNLVSLGKAGASRW-----RGVRPTVRGVAM 231
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 59.3 bits (137), Expect = 8e-08
Identities = 39/106 (36%), Positives = 59/106 (55%)
Frame = +2
Query: 335 GNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVL 514
GN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K +
Sbjct: 297 GNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAK-CVLRLPSGAEKAV 354
Query: 515 PSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
S +GIV+ + KAG + ++ +R P VRGVAM
Sbjct: 355 DSRCHATIGIVSNPSHGTRKLRKAG--HSRWLGRR---PVVRGVAM 395
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 58.4 bits (135), Expect = 1e-07
Identities = 39/106 (36%), Positives = 57/106 (53%)
Frame = +2
Query: 335 GNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVL 514
GN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K++
Sbjct: 322 GNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKLI 381
Query: 515 PSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
S R VGIV+ + KAG + ++ +R P VRGVAM
Sbjct: 382 DSRCRATVGIVSNLHHGKRKLDKAGQS--RWLGRR---PIVRGVAM 422
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/106 (35%), Positives = 59/106 (55%)
Frame = +2
Query: 335 GNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVL 514
GN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K++
Sbjct: 361 GNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEKLI 418
Query: 515 PSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
S R +GIV+ + KAG + ++ +R P VRGVAM
Sbjct: 419 DSRCRATIGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAM 459
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 57.6 bits (133), Expect = 2e-07
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 10/208 (4%)
Frame = +2
Query: 59 AQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHF--- 229
A R G + + H A +L+ +R+ + G V+ I +DP R + +A+V +
Sbjct: 23 AGRNSTGRITLFHRGSH--AKRLQRRIDFQRNTSLTGKVERIEYDPNRSSWIALVRWYSG 80
Query: 230 -RDPYK--FKTRKELFIAPEGLYTGQFVYCGKKA--TLEX--GNVMPVGAMPEGTIVCNL 388
P TR +A + TG V + LE GN + + +P GT++ N+
Sbjct: 81 STQPQHQTASTRFTYILACDKFKTGSPVMNNVHSFGNLEQALGNCVQLAYIPVGTLIHNI 140
Query: 389 EXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRID 568
E G + RA+G FA +I + R ++LPSGA + S R +GIV+
Sbjct: 141 EWNPGQGAKFVRAAGTFAQLIQKHEATVR--LRLPSGALASINSQCRATIGIVSNENHGK 198
Query: 569 XPILKAGXAYHKYKVKRNCWPYVRGVAM 652
KAG + ++ +R P VRGVAM
Sbjct: 199 RNFRKAGQS--RWLGRR---PVVRGVAM 221
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 56.4 bits (130), Expect = 6e-07
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Frame = +2
Query: 161 IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGN 340
+ G + + +DP R A ++ VH D K PEG+ G + G A GN
Sbjct: 74 VPGRIITVEYDPNRSAYISPVHHGDG-----DKGYISHPEGIRVGDAIPTGPGAPTTVGN 128
Query: 341 VMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPS 520
P MP GT++ +E G G+ ARA+G A + + + +LP G + +P
Sbjct: 129 APPPTHMPLGTVMHGIEVAPGKGGQSARAAGAPAKPVA--KEGQSATSRLPPGEVRSIPQ 186
Query: 521 SNRGMVGIVAGGGRIDXPILKAGXAYHK-YKVKRNCWPYVRGVAM 652
+ +VG G +D +G A K + R P VRGV M
Sbjct: 187 NRPAVVG---QAGNVDSKNRASGKAGSKRWPGSR---PRVRGVVM 225
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 55.6 bits (128), Expect = 1e-06
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Frame = +2
Query: 68 KGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 247
+ G + V H +K R + + IKG+V+ I +DP R A +A++ + D
Sbjct: 18 RSRGKISVRHI-GKKHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLD---- 72
Query: 248 KTRKELFIAPEGLYTGQFVYCG-KKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLAR 424
K I L FV K +L GN + + GT++ +E G +R
Sbjct: 73 -GEKRYIIKTNNLEISNFVVSSLNKISLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSR 131
Query: 425 ASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHK 604
+SG+ + +I D K +KLPSG KK + + +G + + + KAG ++
Sbjct: 132 SSGSESEII--FKDNKFGVIKLPSGIKKKISLNCMATIGKIC-TFNVKKKLYKAG--QNR 186
Query: 605 YKVKRNCWPYVRGVAM 652
+ R P VRGVAM
Sbjct: 187 W---RGIRPTVRGVAM 199
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 54.8 bits (126), Expect = 2e-06
Identities = 47/175 (26%), Positives = 81/175 (46%)
Frame = +2
Query: 128 RSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 307
R + Y I G V + +DP R + +A++ + + +APEGL G ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIF 98
Query: 308 CGKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVK 487
+ L+ GN + +P G + ++E + RA+G++AT+I + K +K
Sbjct: 99 AKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SKFEKIVILK 156
Query: 488 LPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
L SG + + S+ +G ++ I KAG Y++K P VRGVAM
Sbjct: 157 LKSGELRRVHSNCMATIGSISNFQYIYRNFRKAGF----YRLK-GWLPVVRGVAM 206
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 54.0 bits (124), Expect = 3e-06
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +2
Query: 335 GNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVL 514
G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K +
Sbjct: 15 GSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKWI 73
Query: 515 PSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
+ R +G V+ + KAG + ++ R P VRGVAM
Sbjct: 74 NAKCRATIGTVSNPSHGTKKLYKAGQS--RWLGIR---PKVRGVAM 114
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 53.2 bits (122), Expect = 5e-06
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +2
Query: 323 TLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGA 502
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 503 KKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
+ + +G+V+ + + KAG + ++ R P VRGVAM
Sbjct: 294 HRYVSLEAVATIGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGVAM 338
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 52.0 bits (119), Expect = 1e-05
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 6/202 (2%)
Frame = +2
Query: 65 RKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDII---HDPGRGAPLAVVHFRD 235
+ G +V+ T R+G + + + V ++I +DP R A LA++ + +
Sbjct: 39 KTGGRNVYGRITSRRRGGGHKKLYRIIDFRRDLIDVPAEVIALEYDPNRTAHLALLKYEN 98
Query: 236 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLE---XGNVMPVGAMPEGTIVCNLEXKMGD 406
K IAP GL G + KATL GN P+ +P T + +E G
Sbjct: 99 G-----DKRYIIAPLGLKVGAKIVTSNKATLNDYVTGNNYPLSIIPPSTKLHCVELVPGK 153
Query: 407 XGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKA 586
+L R +G ++ + +K+PSG +++ R +G V G ++ + KA
Sbjct: 154 GAQLGRTAGTSIELVA--VENGYAQLKMPSGEIRLVNPKCRATIGEVGNGEHMNRKLGKA 211
Query: 587 GXAYHKYKVKRNCWPYVRGVAM 652
G +++ KR P VRG+ M
Sbjct: 212 GR--NRWLGKR---PRVRGMVM 228
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/87 (31%), Positives = 50/87 (57%)
Frame = -3
Query: 412 TXITHFXFKIAHNGTLRHSSNRHHISXFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 233
T +TH +AHNGTL S R +I+ + L+TI++L V G +E+L L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 232 AEVYNSQRCTSTRVMDYILNNSLDVSM 152
AE +S+ + ++D + +++L+V++
Sbjct: 67 AEGNSSKWGAAIGIVDDLGDHTLEVAI 93
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 48.0 bits (109), Expect = 2e-04
Identities = 35/98 (35%), Positives = 50/98 (51%)
Frame = +2
Query: 359 MPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMV 538
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ + V
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 539 GIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
G V G + +AG + KR P VRGV M
Sbjct: 61 GQVGNVGVNQKSLGRAGSKC--WLGKR---PVVRGVVM 93
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 48.0 bits (109), Expect = 2e-04
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Frame = +2
Query: 65 RKGAGSVFVSHTKXRKGAPK--LRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 238
R G V V H R G K +R + +A R +V+ I HDPGR A +A+V ++
Sbjct: 107 RNNTGRVTVRH---RGGGHKRRIRIVDFA-RTAPGPHLVERIEHDPGRSAHIALVRSQET 162
Query: 239 YKFK-------------TRKELFIAPEGLYT--GQFVYCGKKA--TLEXGNVMPVGAMPE 367
K + + PE L+ G V G A T GN +P+ +P
Sbjct: 163 QKLSYILAAEGMRAGDVVQSYMSGIPEDLWKSMGGTVDPGVLAARTAWRGNCLPLHMIPV 222
Query: 368 GTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAK 472
GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 223 GTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 46.8 bits (106), Expect = 5e-04
Identities = 31/109 (28%), Positives = 54/109 (49%)
Frame = +2
Query: 326 LEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAK 505
L+ GN +P+ +P G+I+ + +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 506 KVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
+ + +G+V+ KAG +Y KR P VRG+AM
Sbjct: 280 RYISLDCHATLGVVSNKEHQLISWGKAGR--RRYLGKR---PVVRGMAM 323
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +2
Query: 260 ELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEG 370
E + E +YTGQFV C KKATL NV+P+ + PEG
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 46.0 bits (104), Expect = 8e-04
Identities = 35/109 (32%), Positives = 53/109 (48%)
Frame = +2
Query: 170 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 349
+V +I+HD R A +A+V D K+ E A + L T + + E G+ P
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNE-GDAYP 168
Query: 350 VGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPS 496
+GA+P GT + LE G L A+G F T++ D + V+LPS
Sbjct: 169 LGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 45.2 bits (102), Expect = 0.001
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 2/179 (1%)
Frame = +2
Query: 122 KLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTG-- 295
KL + + + + V + +DP R + +VH + + F+ R + +AP+G + G
Sbjct: 34 KLLKIDFFRKPSHNSFKVLNFFYDPNRSCKVIIVH--NVHTFQPR--IVLAPKGAFQGIN 89
Query: 296 QFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKR 475
F + + + G + G+ V +++ R++G+ V+ D
Sbjct: 90 LFDFTKENPSNSIGCSQFFHNINVGSYVYSIQSTPNSKMTFIRSAGSQGQVV--KKDHYF 147
Query: 476 TXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
T VK+PS K S+ R +G V ++KAG + +++ KR P VRGVAM
Sbjct: 148 TFVKIPSSEVKKFSSNCRACLGQVGNESHFLSSLMKAGES--RWRNKR---PKVRGVAM 201
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 167 GVVKDIIHDPGRGAPLAVVHF---RDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXG 337
G V+ + +DP R A LA++ R+ + T +AP G+ G V CG A + G
Sbjct: 135 GTVERLEYDPIRSARLALLRLDGAREGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPG 194
Query: 338 NVMPVGAMPEGTIVCNLEXKMG 403
+ +P+ A+P G + N+E + G
Sbjct: 195 SSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 44.4 bits (100), Expect = 0.002
Identities = 45/158 (28%), Positives = 73/158 (46%)
Frame = +2
Query: 179 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGA 358
+II+D R LAV +F K F+ + L G + G KA L+ GN +P+
Sbjct: 67 NIIYDSFRRIFLAV-YFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYK 125
Query: 359 MPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMV 538
+ G+ + N+E + G L + + N +I D T VKLPSG K+L + ++
Sbjct: 126 ILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKLPSGEIKLLLKNLFCIL 183
Query: 539 GIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
G + +++ I K K ++ P +RG AM
Sbjct: 184 GQLEIRRKVNKNIKKHAGFNRKLSIR----PKIRGAAM 217
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 43.2 bits (97), Expect = 0.006
Identities = 33/109 (30%), Positives = 53/109 (48%)
Frame = +2
Query: 170 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMP 349
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 350 VGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPS 496
+GA+P GT + LE G L A+G F T++ ++ V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2
Query: 41 MGRVIRAQRKGAGSVFVSHTKXRK 112
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 42.3 bits (95), Expect = 0.010
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = +2
Query: 146 ERHGY-IKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA 322
+R+ Y I G+V+ I +DP R A +A++ + D K K + E + + +
Sbjct: 42 KRNKYNILGIVESIHYDPNRNAKIALIKYLDGDK----KYIIKTNELEVSDKIISSLNNV 97
Query: 323 TLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGA 502
L+ GN + + GT++ E G +R++G+ + +I N + +KL SG
Sbjct: 98 ILKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIFKNNNF--GIIKLSSGI 155
Query: 503 KKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
KK + + +G + ++ + KAG +++K R P VRGVAM
Sbjct: 156 KKKISINCMATIGKIC-TFNLNKKLYKAG--QNRWKGIR---PTVRGVAM 199
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 42.3 bits (95), Expect = 0.010
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Frame = +2
Query: 164 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY-CGKKATLEXGN 340
K V+ + +D R A L ++F D K K +++ + Y G + K+ G
Sbjct: 75 KSVIIGVSYDSNRTA-LTSINF-DILKKKFFNDIYT--KDTYIGNIINRIDSKSEFRNGF 130
Query: 341 VMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPS 520
+ + +P GTI+ N+ + +++GNFA +I D + +KLPSG P
Sbjct: 131 RLLLKQIPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPI 188
Query: 521 SNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
++ +G ++ + I KAG ++ +R P VRGVAM
Sbjct: 189 TSLATIGSISNEQLRNIVIGKAGR--NRNLGRR---PIVRGVAM 227
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 41.9 bits (94), Expect = 0.013
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +2
Query: 173 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKA-TLEXG 337
V ++ +DP R A +A+V + RK IA E + G + G+ A + G
Sbjct: 111 VVEVRYDPCRSADIALVAGGN------RKRWIIATENMQAGDVIKTSAVIGRMAVSANEG 164
Query: 338 NVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVI 451
+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 165 DAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 41.1 bits (92), Expect = 0.023
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +2
Query: 173 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA-TLEXGNVMP 349
V ++ +DP R A +A+V + ++ E A + + T + G+ A + + G+ P
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVI--GRMAVSAKEGDAYP 134
Query: 350 VGAMPEGTIVCNLEXKMGDXGRLARASGNFATVI 451
+GA+P GT+V NLE + G RA+G ++
Sbjct: 135 LGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 41.1 bits (92), Expect = 0.023
Identities = 31/113 (27%), Positives = 55/113 (48%)
Frame = +2
Query: 314 KKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLP 493
K+ L+ G + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 494 SGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
S +++ + +G V+ I+ I K+ A K+ P VRG+AM
Sbjct: 161 SKECRLISNECYATIGTVS---NIEKKIKKSKKASESR--KKGIRPIVRGLAM 208
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 40.3 bits (90), Expect = 0.039
Identities = 34/120 (28%), Positives = 56/120 (46%)
Frame = +2
Query: 293 GQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAK 472
G +Y G+ L+ GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 473 RTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
+KLPSG ++L N+ + I+ I + K +++ KR P VRGVAM
Sbjct: 167 YVTIKLPSGEIRLL---NKNVFCILGELNIIPLFLKKNKAGFNRLLGKR---PKVRGVAM 220
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 40.3 bits (90), Expect = 0.039
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +2
Query: 149 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 316
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 317 KATL-EXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVI 451
A G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 39.9 bits (89), Expect = 0.052
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 652 HGNTTYIWPAVTFDLVLVVCXSSFQNRXVXXXXXXXXTDHASVA*WQNLL 503
HG+T + WPA+ L+LV+ + QN V TDH+ V +LL
Sbjct: 55 HGHTPHAWPAIPLGLILVIGTAGLQNGLVNAATSSHHTDHSPVGRGDDLL 104
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 39.5 bits (88), Expect = 0.069
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 335 GNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVL 514
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 39.1 bits (87), Expect = 0.091
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 335 GNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVI 451
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 38.3 bits (85), Expect = 0.16
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = -3
Query: 538 DHASVA*WQNLLGSRR*LYXCTLSIRIVSNHSGEVSRGTCQTTXITHFXFKIAHNGTLRH 359
+H S + W NLL R L IR+V++ + ++ + T IT+ F + GT
Sbjct: 68 NHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGS 127
Query: 358 SSNRHHISXFKSCFLSTINKLACVEPFGSNEELL 257
+ ++ + FL+ N+LA V ++ +
Sbjct: 128 RAQGQNVIGNEGGFLTAANELARVYALSHHDRFI 161
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 38.3 bits (85), Expect = 0.16
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +2
Query: 335 GNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGHNPDA----KRTXVKLPSGA 502
GN +P+ +P GT + ++ ++ R++G F ++ + + V+L SG
Sbjct: 303 GNFLPLNLIPIGTTIHSITINPLGPAKMVRSAGTFGQLVAFSGRSGGGDSHAQVRLQSGE 362
Query: 503 KKVLPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVKRNCWPYVRGVAM 652
+++PS+ +G V+ + KAG + ++ +R P VRGVAM
Sbjct: 363 VRLIPSNCCAAIGTVSNKDHQHRRLGKAGRS--RWLGRR---PKVRGVAM 407
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 37.9 bits (84), Expect = 0.21
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -3
Query: 412 TXITHFXFKIAHNGTLRHSSNRHHISXFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 233
T +TH +AHNGTL S R +I+ + L+ +++L V +E+L L +
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLMLVPEGM 78
Query: 232 AE 227
AE
Sbjct: 79 AE 80
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 37.1 bits (82), Expect = 0.37
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +2
Query: 335 GNVMPVGAMPEGTIVCNLE-XKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKV 511
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 512 LPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVK 616
L + VG ++ ID I + + ++ K
Sbjct: 218 LHRTCMATVGRLSHAD-IDGKIFGSAQMHRRFGYK 251
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 36.7 bits (81), Expect = 0.49
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Frame = +2
Query: 65 RKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP-Y 241
R G + V H + +G KL L I VV+ + +DP R + +V++++ Y
Sbjct: 41 RDNQGHITVYHKE--RGHKKLYRLVDFYYLKDIPYVVESLEYDPNRSGFINLVYYKNGIY 98
Query: 242 KFKTRKELFIAPEGLYTGQFVYCGKKAT--LEXGNVMPVGAMPEGTIVCNLEXKMGDXGR 415
F +A + G C K L+ GN +P G+IV N+ + +
Sbjct: 99 SF------ILATHNTFIGNVYMCNMKFFDFLKTGNRSLFFNLPIGSIVHNVATTFNEKAK 152
Query: 416 LARASGNFATVIGHNPDAKRTXVKLPS 496
R++G F ++ + VKLPS
Sbjct: 153 YLRSAGTFGLLL--KKENNMALVKLPS 177
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 36.3 bits (80), Expect = 0.64
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 314 KKATLEXGNVMPVGAMPEGTIVCNLEXKMGDXGRLARASGNFATVIGH 457
+ TL+ GNV+P+ +P G V N+ + +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_Q02CU7 Cluster: Tetratricopeptide TPR_2 repeat protein;
n=1; Solibacter usitatus Ellin6076|Rep:
Tetratricopeptide TPR_2 repeat protein - Solibacter
usitatus (strain Ellin6076)
Length = 731
Score = 33.9 bits (74), Expect = 3.4
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Frame = -1
Query: 606 YLWYAXPAFKIGXSIRPPPATIPTMPLLLD----GRTFLAPDGSFTXVRLASGLCPITVA 439
+ W+ AF G +P T+P + +LLD GR L+ F + AS L V
Sbjct: 172 WYWFTLAAFIAGSMAKPMMVTLPVVLVLLDVWPLGRRALSEKIPFFAISAASALTTFAVQ 231
Query: 438 KFPEARARRPXSPIXXSRLHTMVPSGIAPTGITFPXSRVAFFPQ*TNW 295
A P+ + +V + + +P + F+P T++
Sbjct: 232 SGAGAVRNLAIFPLGLRIENALVTYVVYAAKMLWPANLAVFYPYPTDF 279
>UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomonas
neptunium ATCC 15444|Rep: Conserved domain protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 279
Score = 33.1 bits (72), Expect = 6.0
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = +2
Query: 89 VSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIH---DPGRGAPLAVVHFRDPYKFKTRK 259
V R AP+ AE G GV D +H DPG A + H R + R
Sbjct: 27 VVDVSARAAAPRQADRTIAEIAGRSGGVYSDDLHAARDPGASAAFRLAHKRRLEALRMRG 86
Query: 260 ELFIAPEGLYTGQFVYCGKKATLE 331
+ P+G + Y + ATLE
Sbjct: 87 VVTRRPDGTWDVPADYLERAATLE 110
>UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11;
Arabidopsis thaliana|Rep: DC1 domain-containing protein
- Arabidopsis thaliana (Mouse-ear cress)
Length = 692
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 391 FKIAHNGTLRHSSNRH-HISXFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 233
FK + T+ H S+RH H+S K S+ K AC P GS+ L C E +I
Sbjct: 363 FKRNDDNTIDHFSHRHNHMSLDKGGEESSFCK-ACAHPIGSSSSLYKCSECSFI 415
>UniRef50_A6R0K7 Cluster: Predicted protein; n=2;
Pezizomycotina|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 325
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +1
Query: 430 WKLRHCDWTQS*C*AYXSKATVWSQEGSAIKQQRHGRYCCWR 555
W L H DWT K +WS E S I R G Y WR
Sbjct: 48 WCLDHQDWTLE-----DWKRVIWSDEASVILLHRRGGYRIWR 84
>UniRef50_Q9UTS5 Cluster: Zinc finger protein zas1; n=3;
Schizosaccharomyces pombe|Rep: Zinc finger protein zas1
- Schizosaccharomyces pombe (Fission yeast)
Length = 897
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = -1
Query: 552 PATIPTMPLLLDGRTFLAPDGSFTXVRLASGLCPITVAKFPEARARRPXSPIXXSRL 382
PAT+P F P F +L SGL V+ +P+ + +P SRL
Sbjct: 246 PATVPITQAASTANAFQQPSNQFQTQKLPSGLDTRPVSSYPDELTQLESNPDSFSRL 302
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,624,062
Number of Sequences: 1657284
Number of extensions: 13243300
Number of successful extensions: 32372
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 31425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32333
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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