Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_H13
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.3  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   2.2  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   2.2  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.7  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   6.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -3

Query: 361 HSSNRHHISXFKSCFLSTINKLACVEPFGSNEELLPCLELVWIAEVYNSQRCT-STRVMD 185
           +++  + ++  KS  L+   +L+    FG+   L    +L+W  EV N  R      + D
Sbjct: 155 NTNESYELTVLKSDSLAV--RLSAANFFGARHGLETLNQLIWFDEVVNELRILHGVEIRD 212

Query: 184 Y 182
           Y
Sbjct: 213 Y 213


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 240 TSSRQGRSSSLLPKGSTQANLFIVERK 320
           TSS  GRS + LP   T+ + F ++ K
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQCK 54


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 240 TSSRQGRSSSLLPKGSTQANLFIVERK 320
           TSS  GRS + LP   T+ + F ++ K
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQCK 54


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 240 TSSRQGRSSSLLPKGSTQANLFIVERK 320
           TSS  GRS + LP   T+ + F ++ K
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQCK 54


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 430  WKLRHCDWTQS 462
            W   HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 213 WLLYTSAIHTSSRQGRSSSLLPKGSTQANLF 305
           W+        SS+QG        G+T AN+F
Sbjct: 117 WMKEKKTTRKSSQQGNFEFRNTVGATTANIF 147


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -3

Query: 358 SSNRHHISXFKSCFLSTINKLACVEPFG 275
           SSNR H           I  L CV+ +G
Sbjct: 180 SSNRPHQGPLTPILYDHIGDLVCVDFYG 207


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 455 HNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRID 568
           H+P A  +   LP+GA   L  ++ G+V  +A G  ++
Sbjct: 35  HSPCATGSN-GLPAGAGSNLLCASNGLVTTLASGSSLN 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,576
Number of Sequences: 336
Number of extensions: 3192
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)