Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_H13
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   320   4e-88
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    37   0.014
Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical pr...    28   5.0  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  320 bits (787), Expect = 4e-88
 Identities = 141/204 (69%), Positives = 168/204 (82%)
 Frame = +2

Query: 41  MGRVIRAQRKGAGSVFVSHTKXRKGAPKLRSLXYAERHGYIKGVVKDIIHDPGRGAPLAV 220
           MGR IR QRKGAG +F SH K RKGA KLR L YAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1   MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60

Query: 221 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEXGNVMPVGAMPEGTIVCNLEXKM 400
           + FRDPYK+KT K   +A EG++TGQF++CG KA ++ GN++PVG +PEGT +CN+E K 
Sbjct: 61  IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120

Query: 401 GDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKVLPSSNRGMVGIVAGGGRIDXPIL 580
           GD G +ARASGN+ATVI HNPD K+T ++LPSGAKKV+ S NR M+G+VAGGGR D P+L
Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLL 180

Query: 581 KAGXAYHKYKVKRNCWPYVRGVAM 652
           KAG +YHKYK KRN WP VRGVAM
Sbjct: 181 KAGRSYHKYKAKRNSWPRVRGVAM 204


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
 Frame = +2

Query: 335 GNVMPVGAMPEGTIVCNLE-XKMGDXGRLARASGNFATVIGHNPDAKRTXVKLPSGAKKV 511
           GN  P+G++  GT++ ++E     D     +A+G  AT++ H  D   T VKLP   +  
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217

Query: 512 LPSSNRGMVGIVAGGGRIDXPILKAGXAYHKYKVK 616
           L  +    VG ++    ID  I  +   + ++  K
Sbjct: 218 LHRTCMATVGRLSHAD-IDGKIFGSAQMHRRFGYK 251


>Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 152 HGYIKGVVKDIIHDPGRGAPLAVVHFR 232
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 152 HGYIKGVVKDIIHDPGRGAPLAVVHFR 232
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,995,952
Number of Sequences: 27780
Number of extensions: 309747
Number of successful extensions: 668
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)