Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_H12
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 96 2e-20
08_02_1483 - 27451391-27451794,27451883-27452387 35 0.065
03_01_0648 - 4749150-4749275,4749902-4749986,4750761-4750861,475... 33 0.26
05_07_0249 - 28659760-28659831,28660376-28660412,28660691-28660974 32 0.46
12_02_0559 - 20462217-20462780 30 1.4
12_02_0558 - 20453998-20454561 30 1.4
03_01_0245 + 1916718-1917443,1917534-1917719 29 2.4
02_05_0867 - 32338313-32338331,32338372-32338496,32338972-323391... 29 3.2
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 29 4.2
04_01_0356 + 4663723-4664253 28 5.6
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461... 28 5.6
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 5.6
11_05_0077 - 18866707-18867334,18867410-18867555 28 7.4
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 28 7.4
08_02_1189 - 25057398-25057676,25058017-25058070,25058162-250582... 27 9.8
08_02_0570 - 18818175-18818609,18819681-18819689 27 9.8
06_03_0790 - 24636805-24637770 27 9.8
03_01_0603 + 4445977-4446882 27 9.8
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 27 9.8
01_03_0011 + 11630506-11630853 27 9.8
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 96.3 bits (229), Expect = 2e-20
Identities = 50/101 (49%), Positives = 60/101 (59%)
Frame = +1
Query: 208 NGVDPINGKELXVEDLXXXXXXXXXXXXXXSATSIPATLKSMQDEWDALMLHAFTQRQQL 387
+G P+ +EL ++D+ A SIP L Q+EWDA+ML +F QQL
Sbjct: 5 HGKCPVTKEELTMDDIVAVKTNKVVKPRQLQAASIPGLLGMFQNEWDAIMLSSFALEQQL 64
Query: 388 QTARQELSHALYQHDAXCRVIARLTKEVTAAREALATLKPQ 510
TARQELSHALYQHDA CRVIARL KE AR LA + Q
Sbjct: 65 HTARQELSHALYQHDAACRVIARLKKERDEARALLAQAERQ 105
>08_02_1483 - 27451391-27451794,27451883-27452387
Length = 302
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 453 PTHKGGDGGARGPRHTETAGRHCSTPST--TPHGG 551
P H G GG G RH AG S+PST PHGG
Sbjct: 227 PEHSSGGGGGMGGRHA-AAGEAGSSPSTAAAPHGG 260
>03_01_0648 -
4749150-4749275,4749902-4749986,4750761-4750861,
4750933-4751191,4751382-4751434,4752828-4752990,
4753181-4754616
Length = 740
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 465 GGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVS 602
G GGARG H +G S+P+++ G + GS+R V GR S
Sbjct: 87 GQQGGARGAIHVPLSGGFASSPASSTSAGSAPSPGSDRFV-GRSPS 131
>05_07_0249 - 28659760-28659831,28660376-28660412,28660691-28660974
Length = 130
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +3
Query: 408 KSCTVPTRRXVSCDSPTHKGGDGGARGPRHTETAG---RHCSTPSTTPHGGVSRQCGSN 575
+SC R + P G GG G R + G R P TP GG R CG++
Sbjct: 9 RSCRTDARARAA-GRPDLTPGGGGGSGARRSYGCGAGPRAAGWPDLTPGGGAKRSCGAD 66
>12_02_0559 - 20462217-20462780
Length = 187
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 462 KGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 611
+GG GG AGR T P G R+ G R GRG ++ G
Sbjct: 89 RGGGGGGDAGGGDGAAGRR--TVEAAPAAGGGRRQGRERRTAGRGAAAVG 136
>12_02_0558 - 20453998-20454561
Length = 187
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +3
Query: 462 KGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 611
+GG GG AGR T P G R+ G R GRG ++ G
Sbjct: 89 RGGGGGGDAGGGDGAAGRR--TVEAAPAAGGGRRQGRERRTAGRGAAAVG 136
>03_01_0245 + 1916718-1917443,1917534-1917719
Length = 303
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +3
Query: 441 SCDSPTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNRHVCGRG 596
SC GGD RG T T+ R TP T R CG RG
Sbjct: 68 SCCGSGGGGGDNNLRGRSSTTTSARTPRTPKTPCTPTARRLCGVRSRTPRRG 119
>02_05_0867 -
32338313-32338331,32338372-32338496,32338972-32339186,
32340043-32340086,32340187-32340548,32341357-32341650
Length = 352
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 626 SAVARSCRRDTTSADMPVAPALPADASVGCGA 531
S+ ARS T PV+PA PA +VG GA
Sbjct: 19 SSAARSFATGATRFPSPVSPASPAPGAVGGGA 50
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 404 SCLAVCNCCLC-VKACNIRASHSSCMLFSVAGIDVALG 294
S LA C CC+C +KACN + ++ V LG
Sbjct: 667 SRLADCLCCMCCIKACNKMNDQCAIVMTQVCAAFACLG 704
>04_01_0356 + 4663723-4664253
Length = 176
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -2
Query: 383 CCLCVKACNIRASHSSCMLFSV-AGIDVALGGFGFTIGGVLISIRSSTXNSLPLIGSTPF 207
C + + A N SH+S M+F+V +D+A G F + G S R + N+ ++
Sbjct: 84 CIIVLLATNFYLSHTSVMVFNVLVALDMASLGAAF-VAGSSSSKRFTAFNAGLMVCLVVL 142
Query: 206 XIMYXSMILLSN 171
+++ L+ N
Sbjct: 143 FLLWKLKFLMGN 154
>02_05_1224 +
35045268-35045270,35045735-35045863,35046037-35046180,
35046306-35046451,35046583-35046739,35046838-35046896,
35046978-35047137,35047716-35047865,35047969-35048105,
35048186-35048332,35048428-35048540,35048880-35048971,
35049637-35049738,35050108-35050145,35050255-35050381,
35050462-35050632,35050721-35050852,35050929-35051038,
35051118-35051178,35051386-35051427,35051756-35051933,
35052043-35052248,35052843-35052962,35053138-35053182,
35053310-35053408,35053846-35054058,35054254-35054393,
35054469-35054583,35054684-35054722,35054816-35054899,
35054969-35055139,35055891-35056100,35056193-35056378,
35056473-35056601,35056679-35056749,35056834-35056933,
35057016-35057072,35057778-35057834,35057940-35058020,
35058256-35058338,35058448-35058562
Length = 1572
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 41 CNFTAPLRNFQTFKVIS*AKCLSIVRYQMKFPKYQWYHLRQELCLKGESL 190
C + P RN+ F ++ A + RY++ P+ +++L Q C K E L
Sbjct: 245 CQISDPERNYHCFYMLCAAPPEELKRYKLGDPR-TFHYLNQSNCYKLEGL 293
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 529 GVLQCRPAVSVWRGPLAPPSP 467
G+L C P VS RGP+ PP P
Sbjct: 873 GILPC-PPVSAHRGPVIPPPP 892
>11_05_0077 - 18866707-18867334,18867410-18867555
Length = 257
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 465 GGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSNR 578
GG GG G R T G C+ P H G G+ R
Sbjct: 38 GGGGGEAGVRR-RTRGTWCAAPDAVAHRGEDPGVGARR 74
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = +1
Query: 97 KMSLYCAISNXXXXXXXXSPTSGAVFERRIIXKYIIXNGVDPINGKELXVEDL 255
++ YC G+VF+ I YI G P+ G L EDL
Sbjct: 36 RLPFYCCALTFLPFEDPVCTADGSVFDLMSIIPYIKKFGKHPVTGTPLKQEDL 88
>08_02_1189 -
25057398-25057676,25058017-25058070,25058162-25058222,
25058559-25058632,25059291-25059397,25059476-25059611
Length = 236
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 453 PTHKGGDGGARGPRHTETAGRHCSTPSTTPHGGVS 557
P GG GG PR AG CS +TT +G +
Sbjct: 22 PAAHGGGGGRLHPRRPRLAGAFCSL-ATTGNGAAA 55
>08_02_0570 - 18818175-18818609,18819681-18819689
Length = 147
Score = 27.5 bits (58), Expect = 9.8
Identities = 27/89 (30%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Frame = +3
Query: 324 EKHAR*VGRPDV-TCLHTETAVADC*TRIKSCTVPTRRXVSCDSPTHKGGDGGARG---- 488
EKHAR G +V T + AV + + C R C GG G RG
Sbjct: 5 EKHARGGGAEEVATGVGEAAAVVETEEAVVGCLPGGREGSRCRGQREGGGCCGGRGGGGR 64
Query: 489 --PRHTETAGRHCSTPSTTPHGGVSRQCG 569
R R GGV RQCG
Sbjct: 65 WSSRRVGGRRRLMIDVREASLGGVGRQCG 93
>06_03_0790 - 24636805-24637770
Length = 321
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 444 CDSPTHK-GGDGGARGPRH-TETAGRHCSTPSTTPHG 548
C S K GGDG G R T T G H S+ T P G
Sbjct: 283 CSSHRCKHGGDGTGNGQRKITTTGGNHGSSGVTKPKG 319
>03_01_0603 + 4445977-4446882
Length = 301
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 599 DTTSADMPVAPALPADASVGCGAWGA 522
D T+ D PVAPA A S G W A
Sbjct: 26 DCTTTDRPVAPAPAASGSSGDYVWDA 51
>01_06_0481 -
29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 41 CNFTAPLRNFQTFKVIS*AKCLSIVRYQMKFPKYQWYHLRQELCLKGESL 190
C +P RN+ F + A I RY++ P +++L Q C++ + +
Sbjct: 246 CQINSPERNYHCFYFLCAAPPEDIKRYKLGDPS-SFHYLNQSSCIRVDGI 294
>01_03_0011 + 11630506-11630853
Length = 115
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 498 TET-AGRHCSTPSTTPHGGVSRQCGSNRHVCGRGVSSAG 611
TET GR C++ HG V R + RH G+G G
Sbjct: 3 TETDCGRRCTSKHWNHHGSVWRLGRARRHRDGKGEMEVG 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,891,701
Number of Sequences: 37544
Number of extensions: 374587
Number of successful extensions: 1404
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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