Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_H12
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.1  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.8  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 427 HDAXCRVIARLTKEVTAAREALATLKPQAGIAAP 528
           H   CR + RLT++V  +  A   +    G+  P
Sbjct: 205 HGYRCRTMHRLTRQVVVSSVANVRIADHRGVMPP 238


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 427 HDAXCRVIARLTKEVTAAREALATLKPQAGIAAP 528
           H   CR + RLT++V  +  A   +    G+  P
Sbjct: 205 HGYRCRTMHRLTRQVVVSSVANVRIADHRGVMPP 238


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 444 CDSPTHKGGDGGARGPRHTETAGRHC 521
           C S  H    GGA    H E   R C
Sbjct: 301 CVSGEHLSVSGGALNDCHAEVVARRC 326


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 294 RFWLYYRWCFDLNKVLNXQLLAVNRIHAIXYYVL 193
           + WL   W F+L K    Q+  +  IH +   V+
Sbjct: 226 KIWLRPDWLFNLTKYGKNQIKLLEIIHGLTKKVI 259


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 428 CWYSA*LNSCLAVCNCC 378
           C Y A    C A+C+CC
Sbjct: 737 CRYEA---HCFALCHCC 750


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 80  KVIS*AKCLSIVRYQMKFPKYQWYHLRQELCLKGE 184
           +++  A C  +V+    F   ++ ++  E CL GE
Sbjct: 418 RIMGEADCDFVVKLFKTFKDRKYLYMLMEACLGGE 452


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,828
Number of Sequences: 438
Number of extensions: 3491
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)