Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_G24
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 225 5e-58
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 224 2e-57
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 178 1e-43
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 174 2e-42
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 171 9e-42
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 171 1e-41
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 168 9e-41
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 165 8e-40
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 165 1e-39
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 164 2e-39
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 160 2e-38
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 151 2e-35
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 147 2e-34
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 147 2e-34
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 142 9e-33
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 141 2e-32
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 112 6e-24
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 100 3e-20
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 94 2e-18
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 88 1e-16
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 75 2e-12
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 74 3e-12
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 74 3e-12
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 73 5e-12
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 67 3e-10
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 64 3e-09
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 60 5e-08
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 59 1e-07
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 58 2e-07
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 58 2e-07
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 47 3e-04
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 47 5e-04
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 46 0.001
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 42 0.013
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 41 0.022
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.21
UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein DKFZp4... 36 0.64
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.1
UniRef50_Q75LF8 Cluster: Putative uncharacterized protein OSJNBb... 34 2.6
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 3.4
UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19; ... 34 3.4
UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome sh... 33 4.5
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 4.5
UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11... 33 4.5
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 225 bits (551), Expect = 5e-58
Identities = 104/174 (59%), Positives = 125/174 (71%)
Frame = +3
Query: 123 VGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 302
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 303 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 482
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 483 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+DI
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 224 bits (547), Expect = 2e-57
Identities = 106/182 (58%), Positives = 129/182 (70%)
Frame = +3
Query: 99 SIGSPTFTVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 278
S+G+ V V+ E+ + A + VFKAPIRPD+VN+VH + +N+RQ Y VS+ A
Sbjct: 2 SLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELA 61
Query: 279 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXX 458
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 459 XXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWS 638
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWA 181
Query: 639 DI 644
DI
Sbjct: 182 DI 183
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 178 bits (433), Expect = 1e-43
Identities = 91/179 (50%), Positives = 108/179 (60%), Gaps = 4/179 (2%)
Frame = +3
Query: 120 TVGVFREERDGAGXQ-PSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 296
TV V + G P P VF +PIRPD+V VH M+KN RQPY VS++AGHQTSA
Sbjct: 6 TVSVLSADGTATGTTIPLPK--VFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSA 63
Query: 297 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 476
ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 64 ESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFAT 123
Query: 477 XXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDI 644
ARGH I ++ E+PLV+ +V E I +T A L+ + A D+
Sbjct: 124 VSALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDV 182
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 174 bits (423), Expect = 2e-42
Identities = 87/176 (49%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Frame = +3
Query: 120 TVGVFREERDGA-GXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 296
+V V+ D G P P+ VF APIR D+V VH +M+KNSRQ Y V++ +G SA
Sbjct: 6 SVSVYSASSDSVVGTCPLPA--VFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSA 63
Query: 297 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 476
SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 HSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAV 123
Query: 477 XXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
+RGH I +PE+PLVV D +Q KTK+A+ FL+ + A D+
Sbjct: 124 VSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDV 179
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 171 bits (417), Expect = 9e-42
Identities = 80/158 (50%), Positives = 99/158 (62%)
Frame = +3
Query: 171 PSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 350
P VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G
Sbjct: 24 PLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGS 83
Query: 351 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGH 530
GTHRSGQ AFGN CR GRM P K WRRWH ARGH
Sbjct: 84 GTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGH 143
Query: 531 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
I ++P++PLVV DK++ KT A+ FL+R A+ D+
Sbjct: 144 RISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDV 181
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 171 bits (416), Expect = 1e-41
Identities = 82/162 (50%), Positives = 101/162 (62%)
Frame = +3
Query: 141 ERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA 320
ER GA P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA
Sbjct: 16 ERVGATLMPK----VFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRA 71
Query: 321 VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXX 500
+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 72 MARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATA 131
Query: 501 XXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 626
+RGH IE + E+P+VV D +++INKTK AV L +
Sbjct: 132 VVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETI 173
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 168 bits (409), Expect = 9e-41
Identities = 84/166 (50%), Positives = 98/166 (59%)
Frame = +3
Query: 123 VGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 302
V VF P VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAES
Sbjct: 8 VSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAES 67
Query: 303 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 482
WGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 68 WGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAA 127
Query: 483 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLR 620
ARGH I +PELPLV+++++Q INKT AV F +
Sbjct: 128 AIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFK 173
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 165 bits (401), Expect = 8e-40
Identities = 77/166 (46%), Positives = 100/166 (60%)
Frame = +3
Query: 129 VFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 308
V E+R G+ P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWG
Sbjct: 12 VSTEKRMGSTIMPR----VFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWG 67
Query: 309 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXX 488
TGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 68 TGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSV 127
Query: 489 XXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 626
+RGH +E +PELPLV+ D ++ + KT+ AV L +
Sbjct: 128 AATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSM 173
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 165 bits (400), Expect = 1e-39
Identities = 77/151 (50%), Positives = 97/151 (64%)
Frame = +3
Query: 192 APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 371
+PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ
Sbjct: 30 SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGSGTSRNGQ 89
Query: 372 GAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPE 551
AF N RGG M++P K WRRWH ARGH I+ +PE
Sbjct: 90 AAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGHKIDNVPE 149
Query: 552 LPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
LPLVV+D V++I KTK+AV L LKA D+
Sbjct: 150 LPLVVSDDVEQIKKTKEAVKVLAALKASDDV 180
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 164 bits (398), Expect = 2e-39
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = +3
Query: 117 FTVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 296
+T GV+ ++ + Q VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSA
Sbjct: 123 WTHGVYNDKSEPTDTQIRLPG-VFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSA 181
Query: 297 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 440
ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 182 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 160 bits (389), Expect = 2e-38
Identities = 76/145 (52%), Positives = 91/145 (62%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGGTHR
Sbjct: 27 VFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGGTHR 86
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+GQ AFGNMCRGG MF PTK WRRW ARGH I
Sbjct: 87 AGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHRISN 146
Query: 543 IPELPLVVADKVQEINKTKQAVIFL 617
+ E+PLV ++ ++ + KTK A+ FL
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFL 171
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 151 bits (365), Expect = 2e-35
Identities = 77/156 (49%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G+ R
Sbjct: 27 VFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSGSGR 86
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+GQGAFGNM R G MF+P K +R+W ARGH I
Sbjct: 87 NGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHIAG 146
Query: 543 IPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDIL 647
+P++PLVV K + I KTKQAV L+++ A+SD+L
Sbjct: 147 VPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVL 182
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 147 bits (357), Expect = 2e-34
Identities = 72/154 (46%), Positives = 87/154 (56%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGGT R
Sbjct: 24 VFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRR 83
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+GQGAF N CR GRM PTK RRW +ARGH I
Sbjct: 84 AGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHRISD 143
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
+ LP++V+D + + KTK AV LR L ++
Sbjct: 144 VKMLPIIVSDDIAKARKTKDAVEILRNLNMTEEL 177
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 147 bits (356), Expect = 2e-34
Identities = 69/148 (46%), Positives = 87/148 (58%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G GTHR
Sbjct: 22 VFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHR 81
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQGA N CRGGR+F PT WR+WH +RG+ ++
Sbjct: 82 SGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYRVKT 141
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRL 626
IPE+P V+ D +++I KT+ + L L
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTL 169
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 142 bits (343), Expect = 9e-33
Identities = 67/137 (48%), Positives = 82/137 (59%), Gaps = 3/137 (2%)
Frame = +3
Query: 240 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 419
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 420 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 590
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 591 KTKQAVIFLRRLKAWSD 641
KT AV L+ + A +D
Sbjct: 142 KTSAAVALLKAVGAGAD 158
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 141 bits (341), Expect = 2e-32
Identities = 69/175 (39%), Positives = 99/175 (56%)
Frame = +3
Query: 120 TVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 299
TV V +E A P VF PIR ++V +V+V+++KN++QP+ AG + SA
Sbjct: 5 TVNVLTQEGQKASTIELPK--VFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAI 62
Query: 300 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 479
SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 63 SWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIA 122
Query: 480 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
QARGH++ ++ E+P+VV D VQEI +T+ AV L+++ + D+
Sbjct: 123 SAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDV 177
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 112 bits (270), Expect = 6e-24
Identities = 65/175 (37%), Positives = 82/175 (46%)
Frame = +3
Query: 120 TVGVFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 299
TV VF P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 4 TVKVFGPTGTQVAELPRPK--VFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAH 61
Query: 300 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 479
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 62 SWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVA 115
Query: 480 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
+ARGH I +P +PLVV + KTK A+ ++ + D+
Sbjct: 116 SALAASANAALVEARGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDV 168
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 100 bits (239), Expect = 3e-20
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Frame = +3
Query: 129 VFREERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 308
VF E + PS F+ P+R DL+ ++ N RQPY AG +TSAESWG
Sbjct: 5 VFNLEGEEVDTVELPS--FFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWG 62
Query: 309 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXX 485
G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 63 AGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSA 121
Query: 486 XXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
+ RGH+I+ +P LP+VV D+++ +NK ++ F + + W+D+
Sbjct: 122 LAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADV 174
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 94.3 bits (224), Expect = 2e-18
Identities = 55/166 (33%), Positives = 75/166 (45%)
Frame = +3
Query: 147 DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 326
DGA + F PIRPDL+ ++S QP V + AG + S ES+G G +A
Sbjct: 35 DGAYVADIEAPLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIA 94
Query: 327 RIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXX 506
RIPR +G R G F RGGR P K ++ H
Sbjct: 95 RIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYR 151
Query: 507 XXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
ARGH++EK+P LP+VV ++IN+ K+A L W D+
Sbjct: 152 SWVAARGHVVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDV 197
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 88.2 bits (209), Expect = 1e-16
Identities = 38/122 (31%), Positives = 64/122 (52%)
Frame = +3
Query: 276 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 455
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 456 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 635
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 636 SD 641
SD
Sbjct: 179 SD 180
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3
Query: 207 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 573 KVQEINKTKQAVIFLRRLKAWSDI 644
KV+ KTK+ V+ L++LKAW+DI
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDI 121
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 74.5 bits (175), Expect = 2e-12
Identities = 30/42 (71%), Positives = 40/42 (95%)
Frame = +3
Query: 522 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDIL 647
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+L
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVL 46
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/155 (26%), Positives = 70/155 (45%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
+F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 22 IFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG----- 76
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
S + AF GGR P + +H + RGH + +
Sbjct: 77 SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRSAIAATANKELVEQRGHQVSE 136
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDIL 647
+ ++P V+ D+++ + TK+ + L DI+
Sbjct: 137 LEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIV 171
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 73.7 bits (173), Expect = 3e-12
Identities = 43/168 (25%), Positives = 73/168 (43%)
Frame = +3
Query: 141 ERDGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA 320
++DG + +F P+R DL+ V ++ +S QP AG +TSAES+G
Sbjct: 14 DKDGNRIKEVELPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLG 73
Query: 321 VARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXX 500
+AR+PRV+ SG+ A GGR+ P ++
Sbjct: 74 MARVPRVK-----NSGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATA 128
Query: 501 XXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
+ARGH+ + P+VV D + + T + FL+++ + D+
Sbjct: 129 DIAFVRARGHVFKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDV 176
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 73.3 bits (172), Expect = 5e-12
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVARIPRVRGGGT 356
VF P R DL+ + + + QP AG SA+S TG ARI R++GGG
Sbjct: 21 VFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARIARMKGGGG 80
Query: 357 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 536
R G+ RGGR P K + H RGHII
Sbjct: 81 RRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKSTVAGRGHII 140
Query: 537 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
+ I ELP+V++D ++ ++K + L L ++D+
Sbjct: 141 DGI-ELPIVISDDIESVSKASEVRKILSALGLFADV 175
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 67.3 bits (157), Expect = 3e-10
Identities = 40/154 (25%), Positives = 66/154 (42%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 21 VFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG---- 76
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+ GGR P KP R+W + R H+ E
Sbjct: 77 -RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHVFE- 134
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
ELP VV+++++ + +TK R + ++D+
Sbjct: 135 -GELPKVVSNELESVKRTKDVAEVFRAIGVYADV 167
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 64.1 bits (149), Expect = 3e-09
Identities = 48/163 (29%), Positives = 65/163 (39%), Gaps = 9/163 (5%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF +PIR D+VN VH ++KN + + + A PR G
Sbjct: 23 VFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPRPSPGAP-- 80
Query: 363 SGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXXXXXXXXXX 515
+ +CR AP K WRRWH
Sbjct: 81 VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIAASAVPSLL 140
Query: 516 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
ARGH +E +PE+PLVV D I KT +AV L++L A++DI
Sbjct: 141 LARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADI 183
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 60.1 bits (139), Expect = 5e-08
Identities = 40/154 (25%), Positives = 65/154 (42%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 23 VFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGGSRVV 82
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
A G G+ + + + + RGH ++
Sbjct: 83 GIASAVG-----GKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVEAVKKRGHRFKE 137
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
+LP+VV D V+ INKTK A+ L+ L + DI
Sbjct: 138 GLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDI 171
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 58.8 bits (136), Expect = 1e-07
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 1/156 (0%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
+F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 34 IFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG----- 88
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
S + A NM RGGR P + + + RGH
Sbjct: 89 SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAISATSREDLVRQRGHRF-S 147
Query: 543 IPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDIL 647
LP+V+ V +I+ ++A L + + D+L
Sbjct: 148 AETLPIVLDSSVLAKISTAREARSLLESVGVYEDVL 183
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/42 (57%), Positives = 35/42 (83%)
Frame = +3
Query: 519 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDI 43
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 57.6 bits (133), Expect = 2e-07
Identities = 42/154 (27%), Positives = 66/154 (42%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G R
Sbjct: 21 VFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGRARR 79
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
Q GR P K + RGH ++
Sbjct: 80 VPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDR 133
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
E+P+VV+D +++ KT++ V L L +DI
Sbjct: 134 -DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADI 166
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 47.2 bits (107), Expect = 3e-04
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 11/158 (6%)
Frame = +3
Query: 186 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVARIPRV 341
F IR D++ +++ + RQPY S AG Q SA SW T GR ++R+ R
Sbjct: 22 FNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISRVSRA 81
Query: 342 ---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 512
R G +G + P K + W+
Sbjct: 82 ILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATKELDL 140
Query: 513 XQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL 626
+ARGHII+K +P+VV D ++++ KTK+ L +L
Sbjct: 141 VKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKL 175
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +3
Query: 519 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 641
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLD 42
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 45.6 bits (103), Expect = 0.001
Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +2
Query: 350 WYP*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGSSRCCYRRPSARSG*RT 529
W VR C+R HV WW +VR E L LAP QP A L C R A +G
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAGDVA 191
Query: 530 HY*KDSRA--SLGCS*QSPGDQQDQTGCHLPE 619
RA + G PG ++D+ G +PE
Sbjct: 192 RPPDRQRAGGAAGGGGLDPGLREDEGGYGVPE 223
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 41.9 bits (94), Expect = 0.013
Identities = 37/140 (26%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESWGTGRAVARIPRV 341
VF IR DL+ ++ N RQ Y + +AG + S E WG GR V+RI R
Sbjct: 53 VFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWWGKGRGVSRIMRK 112
Query: 342 RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQA 521
G T A RGGR K + W
Sbjct: 113 AGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSAIAASASSNLVSE 167
Query: 522 RGHIIEKIPELPLVVADKVQ 581
RGH E P+++ V+
Sbjct: 168 RGHHFEASLRFPIIIDGYVE 187
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.1 bits (92), Expect = 0.022
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 519 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDI 644
ARGH IE + ELPLV+ D + ++KT + L+++ A D+
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDV 65
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.21
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -3
Query: 418 VGANIRPPRHMLPKAP*P 365
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q9UFE2 Cluster: Putative uncharacterized protein
DKFZp434E026; n=1; Homo sapiens|Rep: Putative
uncharacterized protein DKFZp434E026 - Homo sapiens
(Human)
Length = 158
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2
Query: 521 SLNERWDAGSSNGCCQGRSPLSEVDATVPAPPGL 420
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 324 ARIPRVRGGGTHRSGQGAFGNMCRGG 401
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q75LF8 Cluster: Putative uncharacterized protein
OSJNBb0079B16.11; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0079B16.11 - Oryza sativa subsp. japonica (Rice)
Length = 228
Score = 34.3 bits (75), Expect = 2.6
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +3
Query: 135 REERDGAGXQPSP---SRFVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAES 302
R+ + G+G + P ++ AP D +V S + R P C S E + +AES
Sbjct: 90 RQRQGGSGWERHPWPHDSWIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAES 149
Query: 303 WGTGRAVARIPRVRGGGTHRSGQGA 377
TG A R R+ G T+ + + A
Sbjct: 150 GATGLAHTRAGRIHAGPTNDNDEEA 174
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 294 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 404
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_Q6PEV8 Cluster: Uncharacterized protein CXorf39; n=19;
Euteleostomi|Rep: Uncharacterized protein CXorf39 - Homo
sapiens (Human)
Length = 388
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = -2
Query: 614 EDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSS--------NGCCQGRSPL 459
+ D + L+D DF S++ G++ ++VSSS++ WD S + G L
Sbjct: 93 DQDDCYSLLDDQDFTSFDLFPEGSVCSDVSSSISTYWDWSDSEFEWQLPGSDIASGSDVL 152
Query: 458 SEVDATVPAPPGL 420
S+V ++P+ P L
Sbjct: 153 SDVIPSIPSSPCL 165
>UniRef50_Q4RK83 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 2
SCAF15032, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 386
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 395 WWTYVRPHEA---LAALAPSRQPPTAE-SGLGSSRCCYRRPSARS 517
WWT RPH +A AP R P T SGLGS YRRP R+
Sbjct: 306 WWT--RPHRRGTRPSARAPPRVPATPPPSGLGSGCYGYRRPLGRT 348
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 4.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 397 PRHMLPKAP*PDLWVPPPR 341
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_A2QMQ0 Cluster: Contig An07c0080, complete genome; n=11;
Pezizomycotina|Rep: Contig An07c0080, complete genome -
Aspergillus niger
Length = 598
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -2
Query: 647 KDIRPCLEAPQEDDSLFGLVDLLDFVSYNQGKLGNLFNNVSSSLNERWDAGSSNGCCQGR 468
+ + PC+ A D F L L+F S N + F+ ++ +E G++NG QG
Sbjct: 283 QSVDPCISAQVAQDHTFAL---LEFKSPNDATVALAFDGIAMEEHEAAGNGAANGAAQGL 339
Query: 467 SPLSEVDATVP 435
D VP
Sbjct: 340 EVRRPKDYIVP 350
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 32.7 bits (71), Expect = 7.9
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 240 KNSRQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 407
+N+ P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,140,219
Number of Sequences: 1657284
Number of extensions: 13342646
Number of successful extensions: 43529
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 41290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43472
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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