Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_G20
         (557 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0096 - 26408159-26408911,26409012-26409440                       28   4.4  
03_06_0052 - 31295839-31295883,31296312-31296380,31296458-312965...    27   7.7  

>01_06_0096 - 26408159-26408911,26409012-26409440
          Length = 393

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 302 INFVSFSGNAWIRTMSPVLHIFXESW 225
           IN + F G A +RT+SP+ H    +W
Sbjct: 264 INDIRFRGKAIVRTLSPMSHFEGGAW 289


>03_06_0052 -
           31295839-31295883,31296312-31296380,31296458-31296521,
           31296598-31296680,31297243-31297308,31297426-31297516,
           31298090-31298247,31298432-31298476,31299189-31299318,
           31300685-31300935
          Length = 333

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 193 MYFRKEEFYYCHDS-XKICKTGDIVLIQALPEKLTK 297
           M FRKE F+Y HD+  ++ K   ++  +AL   L K
Sbjct: 225 MIFRKEPFFYGHDNHDQLVKIAKVLGTEALNAYLNK 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,933,868
Number of Sequences: 37544
Number of extensions: 223336
Number of successful extensions: 446
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)