Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_G20
(557 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054031-1|AAH54031.1| 130|Homo sapiens mitochondrial ribosomal... 86 9e-17
BC047445-1|AAH47445.2| 130|Homo sapiens mitochondrial ribosomal... 86 9e-17
BC037405-1|AAH37405.1| 142|Homo sapiens MRPS17 protein protein. 86 9e-17
AB049950-1|BAB41003.1| 130|Homo sapiens mitochondrial ribosomal... 86 9e-17
AC004973-1|AAC62432.1| 391|Homo sapiens WUGSC:H_DJ1139I01.1 pro... 84 3e-16
BC041560-1|AAH41560.1| 859|Homo sapiens ABCC4 protein protein. 30 4.8
AY207008-1|AAO37649.1| 1325|Homo sapiens ATP-binding cassette tr... 30 4.8
AY081219-1|AAL88745.1| 1325|Homo sapiens multidrug resistance-as... 30 4.8
AL356257-1|CAI16722.1| 1325|Homo sapiens ATP-binding cassette, s... 30 4.8
AL157818-1|CAC36037.2| 1325|Homo sapiens ATP-binding cassette, s... 30 4.8
AL139381-1|CAI16589.1| 1325|Homo sapiens ATP-binding cassette, s... 30 4.8
AF541977-1|AAN17334.1| 1278|Homo sapiens ATP-binding cassette pr... 30 4.8
AF071203-1|AAC27077.1| 893|Homo sapiens ABC transporter MOAT-B ... 30 4.8
AF071202-1|AAC27076.1| 1325|Homo sapiens ABC transporter MOAT-B ... 30 4.8
AB208973-1|BAD92210.1| 776|Homo sapiens ABCC4 protein variant p... 30 4.8
BC028364-1|AAH28364.1| 1061|Homo sapiens FBXW10 protein protein. 30 6.3
AY729024-1|AAU43731.1| 1052|Homo sapiens ubiquitin ligase specif... 30 6.3
>BC054031-1|AAH54031.1| 130|Homo sapiens mitochondrial ribosomal
protein S17 protein.
Length = 130
Score = 85.8 bits (203), Expect = 9e-17
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 109 LLGQCVPTVKQNAAKIXVKRLELXENLLMYFRKEEFYYCHDSXKICKTGDIVLIQALPEK 288
++G+ + T Q AK+ V RL L LL YF K + Y+ HD+ + C GDIVL++ALP
Sbjct: 13 IVGKVIGTKMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLRALPVP 72
Query: 289 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQY-KXXIERQTELYGRLKSTFNYSKA 456
K + HE+ E+V+ G + DPVTGK + Y + + +T + N S A
Sbjct: 73 RAKHVKHELAEIVFKVGKVIDPVTGKPCAGTTYLESPLSSETTQLSKNLEELNISSA 129
>BC047445-1|AAH47445.2| 130|Homo sapiens mitochondrial ribosomal
protein S17 protein.
Length = 130
Score = 85.8 bits (203), Expect = 9e-17
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 109 LLGQCVPTVKQNAAKIXVKRLELXENLLMYFRKEEFYYCHDSXKICKTGDIVLIQALPEK 288
++G+ + T Q AK+ V RL L LL YF K + Y+ HD+ + C GDIVL++ALP
Sbjct: 13 IVGKVIGTKMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLRALPVP 72
Query: 289 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQY-KXXIERQTELYGRLKSTFNYSKA 456
K + HE+ E+V+ G + DPVTGK + Y + + +T + N S A
Sbjct: 73 RAKHVKHELAEIVFKVGKVIDPVTGKPCAGTTYLESPLSSETTQLSKNLEELNISSA 129
>BC037405-1|AAH37405.1| 142|Homo sapiens MRPS17 protein protein.
Length = 142
Score = 85.8 bits (203), Expect = 9e-17
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 109 LLGQCVPTVKQNAAKIXVKRLELXENLLMYFRKEEFYYCHDSXKICKTGDIVLIQALPEK 288
++G+ + T Q AK+ V RL L LL YF K + Y+ HD+ + C GDIVL++ALP
Sbjct: 25 IVGKVIGTKMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLRALPVP 84
Query: 289 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQY-KXXIERQTELYGRLKSTFNYSKA 456
K + HE+ E+V+ G + DPVTGK + Y + + +T + N S A
Sbjct: 85 RAKHVKHELAEIVFKVGKVIDPVTGKPCAGTTYLESPLSSETTQLSKNLEELNISSA 141
>AB049950-1|BAB41003.1| 130|Homo sapiens mitochondrial ribosomal
protein S17 protein.
Length = 130
Score = 85.8 bits (203), Expect = 9e-17
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 109 LLGQCVPTVKQNAAKIXVKRLELXENLLMYFRKEEFYYCHDSXKICKTGDIVLIQALPEK 288
++G+ + T Q AK+ V RL L LL YF K + Y+ HD+ + C GDIVL++ALP
Sbjct: 13 IVGKVIGTKMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLRALPVP 72
Query: 289 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQY-KXXIERQTELYGRLKSTFNYSKA 456
K + HE+ E+V+ G + DPVTGK + Y + + +T + N S A
Sbjct: 73 RAKHVKHELAEIVFKVGKVIDPVTGKPCAGTTYLESPLSSETTQLSKNLEELNISSA 129
>AC004973-1|AAC62432.1| 391|Homo sapiens WUGSC:H_DJ1139I01.1
protein.
Length = 391
Score = 84.2 bits (199), Expect = 3e-16
Identities = 38/93 (40%), Positives = 58/93 (62%)
Frame = +1
Query: 109 LLGQCVPTVKQNAAKIXVKRLELXENLLMYFRKEEFYYCHDSXKICKTGDIVLIQALPEK 288
++G+ T Q AK+ V RL L +LL Y+ K++ Y+ H++ + C GDIVL++ALP
Sbjct: 13 IMGKVTGTKMQKTAKVRVIRLVLDPHLLKYYNKQKTYFAHNALQQCTIGDIVLLKALPVP 72
Query: 289 LTKLITHEIKEVVYPFGDITDPVTGKKVSKEQY 387
TK + HE+ E+V+ G + DPVTGK + Y
Sbjct: 73 RTKHVKHELAEIVFKVGKLVDPVTGKPCAGTTY 105
>BC041560-1|AAH41560.1| 859|Homo sapiens ABCC4 protein protein.
Length = 859
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 634 DNEESEQPP 642
>AY207008-1|AAO37649.1| 1325|Homo sapiens ATP-binding cassette
transporter C4 protein.
Length = 1325
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 634 DNEESEQPP 642
>AY081219-1|AAL88745.1| 1325|Homo sapiens multidrug
resistance-associated protein protein.
Length = 1325
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 634 DNEESEQPP 642
>AL356257-1|CAI16722.1| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 634 DNEESEQPP 642
>AL157818-1|CAC36037.2| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 634 DNEESEQPP 642
>AL139381-1|CAI16589.1| 1325|Homo sapiens ATP-binding cassette,
sub-family C (CFTR/MRP), member 4 protein.
Length = 1325
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 634 DNEESEQPP 642
>AF541977-1|AAN17334.1| 1278|Homo sapiens ATP-binding cassette
protein C4 splice variant A protein.
Length = 1278
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 634 DNEESEQPP 642
>AF071203-1|AAC27077.1| 893|Homo sapiens ABC transporter MOAT-B
isoform protein.
Length = 893
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 165 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 223
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 224 DNEESEQPP 232
>AF071202-1|AAC27076.1| 1325|Homo sapiens ABC transporter MOAT-B
protein.
Length = 1325
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 575 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 633
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 634 DNEESEQPP 642
>AB208973-1|BAD92210.1| 776|Homo sapiens ABCC4 protein variant
protein.
Length = 776
Score = 30.3 bits (65), Expect = 4.8
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 256 DIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKXXIERQTELYGRLKS 435
++ + Q L EK+T L+TH++ + + I GK V K Y ++ + LK
Sbjct: 492 ELCICQILHEKITILVTHQL-QYLKAASQILILKDGKMVQKGTYTEFLKSGIDFGSLLKK 550
Query: 436 TFNYSKAPP 462
S+ PP
Sbjct: 551 DNEESEQPP 559
>BC028364-1|AAH28364.1| 1061|Homo sapiens FBXW10 protein protein.
Length = 1061
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 169 LELXENLLMYFRKEEFYYCHDSXKICKTGDIVLIQALPEKLTKLITHEIKEVVYPFGDIT 348
L +N+L + ++F Y + K V+ +L + L K + ++KE++Y F + T
Sbjct: 70 LHYFQNILQTTQGKDFIYNRSRINLSKKEGKVVKSSLNQMLDKTVEQKMKEILYWFANST 129
>AY729024-1|AAU43731.1| 1052|Homo sapiens ubiquitin ligase
specificity factor protein.
Length = 1052
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 169 LELXENLLMYFRKEEFYYCHDSXKICKTGDIVLIQALPEKLTKLITHEIKEVVYPFGDIT 348
L +N+L + ++F Y + K V+ +L + L K + ++KE++Y F + T
Sbjct: 70 LHYFQNILQTTQGKDFIYNRSRINLSKKEGKVVKSSLNQMLDKTVEQKMKEILYWFANST 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,166,950
Number of Sequences: 237096
Number of extensions: 1347188
Number of successful extensions: 10218
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10218
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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