Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_G15
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein. 234 2e-61
BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7 pro... 234 2e-61
BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8 pro... 91 3e-18
AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein. 91 3e-18
AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein... 91 3e-18
BC142978-1|AAI42979.1| 439|Homo sapiens exosome component 9 pro... 87 7e-17
AJ517294-1|CAD56889.1| 456|Homo sapiens polymyositis/scleroderm... 87 7e-17
AJ505989-1|CAD44530.1| 439|Homo sapiens polymyositis/scleroderm... 87 7e-17
U09215-1|AAA18832.1| 372|Homo sapiens PM-Scl-75 autoantigen pro... 58 2e-08
M58460-1|AAA58384.1| 355|Homo sapiens autoantigen protein. 58 2e-08
AC079341-2|AAY40968.1| 355|Homo sapiens unknown protein. 58 2e-08
AF260333-1|AAG44664.1| 142|Homo sapiens AD036 protein. 32 1.6
BC121179-1|AAI21180.1| 722|Homo sapiens glucosamine (UDP-N-acet... 32 2.1
AY531128-1|AAS59259.1| 722|Homo sapiens UDP-N-acetylglucosamine... 32 2.1
AY531127-1|AAS59258.1| 722|Homo sapiens UDP-N-acetylglucosamine... 32 2.1
AY531126-1|AAS59257.1| 722|Homo sapiens UDP-N-acetylglucosamine... 32 2.1
AM697709-1|CAM91425.1| 681|Homo sapiens UDP-N-acetylglucosamine... 32 2.1
AM697708-1|CAM91424.1| 753|Homo sapiens UDP-N-acetylglucosamine... 32 2.1
AL158830-7|CAD13389.1| 722|Homo sapiens glucosamine (UDP-N-acet... 32 2.1
AJ238764-1|CAB42607.1| 722|Homo sapiens UDP-N-acetylglucosamine... 32 2.1
AF317635-1|AAG31661.1| 722|Homo sapiens UDP-N-acetylglucosamine... 32 2.1
AF155663-1|AAD38197.1| 722|Homo sapiens UDP-N-acetylglucosamine... 32 2.1
AF051852-1|AAD32251.1| 722|Homo sapiens UDP-N-acetylglucosamine... 32 2.1
D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein. 30 6.3
BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage ... 30 6.3
BC131491-1|AAI31492.1| 778|Homo sapiens MDC1 protein protein. 30 6.3
BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein. 30 6.3
AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage... 30 6.3
AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage... 30 6.3
AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage ... 30 6.3
AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage ... 30 6.3
AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein. 30 6.3
AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila... 30 6.3
>D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein.
Length = 290
Score = 234 bits (572), Expect = 2e-61
Identities = 107/171 (62%), Positives = 138/171 (80%)
Frame = +1
Query: 142 EKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP 321
EKV+IVHGVQED R DGR DYR +E+ETDVVS+ SGSAR++L +TDILVG+K E+ TP
Sbjct: 9 EKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTP 68
Query: 322 KPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXG 501
K +KP+ G +EFFVDCSA+ATPEFEGRGG++L + I+NT+ R +++ + DLK LCI
Sbjct: 69 KLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLCISPR 128
Query: 502 KQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 654
+ CW LYVD+L+LECGGNLFDA+S+A KAALFNTRIP V+ L + G+ D+
Sbjct: 129 EHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGSKDI 179
>BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7
protein.
Length = 291
Score = 234 bits (572), Expect = 2e-61
Identities = 107/171 (62%), Positives = 138/171 (80%)
Frame = +1
Query: 142 EKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP 321
EKV+IVHGVQED R DGR DYR +E+ETDVVS+ SGSAR++L +TDILVG+K E+ TP
Sbjct: 10 EKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTP 69
Query: 322 KPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXG 501
K +KP+ G +EFFVDCSA+ATPEFEGRGG++L + I+NT+ R +++ + DLK LCI
Sbjct: 70 KLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLCISPR 129
Query: 502 KQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 654
+ CW LYVD+L+LECGGNLFDA+S+A KAALFNTRIP V+ L + G+ D+
Sbjct: 130 EHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGSKDI 180
>BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8
protein.
Length = 276
Score = 91.1 bits (216), Expect = 3e-18
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = +1
Query: 166 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 345
++E+ R DGR ++R + +S A GSA ++L NT ++ G+K E P D PD G
Sbjct: 18 LKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKG 77
Query: 346 KIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXGKQCWKLY 522
+ VD + F G GE A S + +SQ + LCI GK W LY
Sbjct: 78 YVVPNVDLPPLCSSRFRSGPPGEE-AQVASQFIADVIENSQIIQKEDLCISPGKLVWVLY 136
Query: 523 VDILILECGGNLFDAVSLATKAALFNTRIPLV 618
D++ L+ GN+ DA + A AAL N ++P V
Sbjct: 137 CDLICLDYDGNILDACTFALLAALKNVQLPEV 168
>AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein.
Length = 275
Score = 91.1 bits (216), Expect = 3e-18
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = +1
Query: 166 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 345
++E+ R DGR ++R + +S A GSA ++L NT ++ G+K E P D PD G
Sbjct: 18 LKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKG 77
Query: 346 KIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXGKQCWKLY 522
+ VD + F G GE A S + +SQ + LCI GK W LY
Sbjct: 78 YVVPNVDLPPLCSSRFRSGPPGEE-AQVASQFIADVIENSQIIQKEDLCISPGKLVWVLY 136
Query: 523 VDILILECGGNLFDAVSLATKAALFNTRIPLV 618
D++ L+ GN+ DA + A AAL N ++P V
Sbjct: 137 CDLICLDYDGNILDACTFALLAALKNVQLPEV 168
>AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein
OIP2 protein.
Length = 265
Score = 91.1 bits (216), Expect = 3e-18
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = +1
Query: 166 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 345
++E+ R DGR ++R + +S A GSA ++L NT ++ G+K E P D PD G
Sbjct: 16 LKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKG 75
Query: 346 KIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXGKQCWKLY 522
+ VD + F G GE A S + +SQ + LCI GK W LY
Sbjct: 76 YVVPNVDLPPLCSSRFRSGPPGEE-AQVASQFIADVIENSQIIQKEDLCISPGKLVWVLY 134
Query: 523 VDILILECGGNLFDAVSLATKAALFNTRIPLV 618
D++ L+ GN+ DA + A AAL N ++P V
Sbjct: 135 CDLICLDYDGNILDACTFALLAALKNVQLPEV 166
>BC142978-1|AAI42979.1| 439|Homo sapiens exosome component 9
protein.
Length = 439
Score = 86.6 bits (205), Expect = 7e-17
Identities = 47/157 (29%), Positives = 81/157 (51%)
Frame = +1
Query: 142 EKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP 321
E+ F++ ++E R DGR DYR + + G + L T +L + E+ +P
Sbjct: 10 ERRFLLRAIEEKKRLDGRQTYDYRNIRISFGT---DYGCCIVELGKTRVLGQVSCELVSP 66
Query: 322 KPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXG 501
K ++ G + F ++ S A P FE +L ++ M+R +S+ D + LC+V G
Sbjct: 67 KLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAG 126
Query: 502 KQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 612
++ W++ VD+ +L GN+ DA S+A AL + R P
Sbjct: 127 EKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRP 163
>AJ517294-1|CAD56889.1| 456|Homo sapiens polymyositis/scleroderma
autoantigen 1 protein.
Length = 456
Score = 86.6 bits (205), Expect = 7e-17
Identities = 47/157 (29%), Positives = 81/157 (51%)
Frame = +1
Query: 142 EKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP 321
E+ F++ ++E R DGR DYR + + G + L T +L + E+ +P
Sbjct: 10 ERRFLLRAIEEKKRLDGRQTYDYRNIRISFGT---DYGCCIVELGKTRVLGQVSCELVSP 66
Query: 322 KPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXG 501
K ++ G + F ++ S A P FE +L ++ M+R +S+ D + LC+V G
Sbjct: 67 KLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAG 126
Query: 502 KQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 612
++ W++ VD+ +L GN+ DA S+A AL + R P
Sbjct: 127 EKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRP 163
>AJ505989-1|CAD44530.1| 439|Homo sapiens polymyositis/scleroderma
autoantigen 1 protein.
Length = 439
Score = 86.6 bits (205), Expect = 7e-17
Identities = 47/157 (29%), Positives = 81/157 (51%)
Frame = +1
Query: 142 EKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP 321
E+ F++ ++E R DGR DYR + + G + L T +L + E+ +P
Sbjct: 10 ERRFLLRAIEEKKRLDGRQTYDYRNIRISFGT---DYGCCIVELGKTRVLGQVSCELVSP 66
Query: 322 KPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXG 501
K ++ G + F ++ S A P FE +L ++ M+R +S+ D + LC+V G
Sbjct: 67 KLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAG 126
Query: 502 KQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 612
++ W++ VD+ +L GN+ DA S+A AL + R P
Sbjct: 127 EKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRP 163
>U09215-1|AAA18832.1| 372|Homo sapiens PM-Scl-75 autoantigen
protein.
Length = 372
Score = 58.4 bits (135), Expect = 2e-08
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +1
Query: 379 ATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXGKQCWKLYVDILILECGGNL 558
A P FE +L ++ M+R +S+ D + LC+V G++ W++ VD+ +L GN+
Sbjct: 2 AAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNI 61
Query: 559 FDAVSLATKAALFNTRIP 612
DA S+A AL + R P
Sbjct: 62 IDAASIAAIVALCHFRRP 79
>M58460-1|AAA58384.1| 355|Homo sapiens autoantigen protein.
Length = 355
Score = 58.4 bits (135), Expect = 2e-08
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +1
Query: 379 ATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXGKQCWKLYVDILILECGGNL 558
A P FE +L ++ M+R +S+ D + LC+V G++ W++ VD+ +L GN+
Sbjct: 2 AAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNI 61
Query: 559 FDAVSLATKAALFNTRIP 612
DA S+A AL + R P
Sbjct: 62 IDAASIAAIVALCHFRRP 79
>AC079341-2|AAY40968.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 58.4 bits (135), Expect = 2e-08
Identities = 27/78 (34%), Positives = 44/78 (56%)
Frame = +1
Query: 379 ATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVXGKQCWKLYVDILILECGGNL 558
A P FE +L ++ M+R +S+ D + LC+V G++ W++ VD+ +L GN+
Sbjct: 2 AAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNI 61
Query: 559 FDAVSLATKAALFNTRIP 612
DA S+A AL + R P
Sbjct: 62 IDAASIAAIVALCHFRRP 79
>AF260333-1|AAG44664.1| 142|Homo sapiens AD036 protein.
Length = 142
Score = 32.3 bits (70), Expect = 1.6
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -2
Query: 626 KAFTNGILVLNRAALVANETASNKLPPHSKINIST*SFQHCLPXTMHSCFKSKACDE*Y- 450
K +TN + VL+ L +S+ + H + I P T +S FKS CD +
Sbjct: 31 KTWTNQVHVLHLYVLCQYPRSSHMVDIHMEFQIQNRLPLPSCPYTSYSLFKSSICDFSFP 90
Query: 449 -ALCIVFEMLLAKFSP 405
+L I FE + FSP
Sbjct: 91 ESLKIQFENVYNTFSP 106
>BC121179-1|AAI21180.1| 722|Homo sapiens glucosamine
(UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 138
>AY531128-1|AAS59259.1| 722|Homo sapiens
UDP-N-acetylglucosamine-2-epimerase /
N-acetylmannosamine kinase protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 138
>AY531127-1|AAS59258.1| 722|Homo sapiens
UDP-N-acetylglucosamine-2-epimerase /
N-acetylmannosamine kinase protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 138
>AY531126-1|AAS59257.1| 722|Homo sapiens
UDP-N-acetylglucosamine-2-epimerase /
N-acetylmannosamine kinase protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 138
>AM697709-1|CAM91425.1| 681|Homo sapiens UDP-N-acetylglucosamine
2-epimerase/N-acetylmannosamine kinase protein.
Length = 681
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 60 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 97
>AM697708-1|CAM91424.1| 753|Homo sapiens UDP-N-acetylglucosamine
2-epimerase/N-acetylmannosamine kinase protein.
Length = 753
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 132 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 169
>AL158830-7|CAD13389.1| 722|Homo sapiens glucosamine
(UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 138
>AJ238764-1|CAB42607.1| 722|Homo sapiens
UDP-N-acetylglucosamine-2-epimerase /
N-acetylmannosamine kinase protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 138
>AF317635-1|AAG31661.1| 722|Homo sapiens UDP-N-acetylglucosamine
2-epimerase protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 138
>AF155663-1|AAD38197.1| 722|Homo sapiens
UDP-N-acetylglucosamine-2-epimerase/N- acetylmannosamine
kinase protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 138
>AF051852-1|AAD32251.1| 722|Homo sapiens
UDP-N-acetylglucosamine-2-epimerase protein.
Length = 722
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 514 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 648
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEV 138
>D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 1645 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 1682
>BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 1644 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 1681
>BC131491-1|AAI31492.1| 778|Homo sapiens MDC1 protein protein.
Length = 778
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 333 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 370
>BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 1645 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 1682
>AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 1644 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 1681
>AL845353-21|CAI41890.1| 1244|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 1244
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 1034 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 1071
>AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 1644 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 1681
>AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 1644 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 1681
>AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein.
Length = 2089
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 1644 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 1681
>AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila
photoreceptor protein calphotin protein.
Length = 2089
Score = 30.3 bits (65), Expect = 6.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 301 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN 414
++ + TPKP +P +E F + TPE +GG++
Sbjct: 1644 RSSVKTPKPVEPAASDLEPFTPTDQSVTPEAIAQGGQS 1681
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,900,313
Number of Sequences: 237096
Number of extensions: 2071637
Number of successful extensions: 7660
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 7542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7657
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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