Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_G15
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.5
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.5
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 1.5
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 3.4
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.0
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 6.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.0
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 570 NCIKQITPTFQDQYINIKFPALFAXYN 490
N + +TP+ D+Y I FP F +N
Sbjct: 394 NKLYGMTPSDIDKYSRIVFPVCFVCFN 420
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 570 NCIKQITPTFQDQYINIKFPALFAXYN 490
N + +TP+ D+Y I FP F +N
Sbjct: 394 NKLYGMTPSDIDKYSRIVFPVCFVCFN 420
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 570 NCIKQITPTFQDQYINIKFPALFAXYN 490
N + +TP+ D+Y I FP F +N
Sbjct: 332 NKLYGMTPSDIDKYSRIVFPVCFVCFN 358
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -2
Query: 188 SERKSSCTP*TIKTFSVER**QSCHVYCFCLFTKVTSFIIYV 63
+E ++ T TI F+VER CH + +K++ + ++
Sbjct: 134 AETSANATVLTITAFTVERYIAICHPFISHTMSKLSRAVKFI 175
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 225 RNRCSEPRKWLSAASSCKHRHFSWH*NRNRYTKARQTRYGKN 350
R R EP+ S +++ + +++ + N N Y ++ Y N
Sbjct: 73 RERSKEPKIVSSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 225 RNRCSEPRKWLSAASSCKHRHFSWH*NRNRYTKARQTRYGKN 350
R R EP+ S +++ + +++ + N N Y ++ Y N
Sbjct: 73 RERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 225 RNRCSEPRKWLSAASSCKHRHFSWH*NRNRYTKARQTRYGKN 350
R R EP+ S +++ + +++ + N N Y ++ Y N
Sbjct: 73 RERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 225 RNRCSEPRKWLSAASSCKHRHFSWH*NRNRYTKARQTRYGKN 350
R R EP+ S +++ + +++ + N N Y ++ Y N
Sbjct: 73 RERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 225 RNRCSEPRKWLSAASSCKHRHFSWH*NRNRYTKARQTRYGKN 350
R R EP+ S +++ + +++ + N N Y ++ Y N
Sbjct: 73 RERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 225 RNRCSEPRKWLSAASSCKHRHFSWH*NRNRYTKARQTRYGKN 350
R R EP+ S +++ + +++ + N N Y ++ Y N
Sbjct: 73 RERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 225 RNRCSEPRKWLSAASSCKHRHFSWH*NRNRYTKARQTRYGKN 350
R R EP+ S +++ + +++ + N N Y ++ Y N
Sbjct: 73 RERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 225 RNRCSEPRKWLSAASSCKHRHFSWH*NRNRYTKARQTRYGKN 350
R R EP+ S +++ + +++ + N N Y ++ Y N
Sbjct: 73 RERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNYKKLYYNIN 114
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 614 NGILVLNRAALVANETAS 561
NG+ VLNR L N AS
Sbjct: 404 NGLFVLNRLTLSGNAIAS 421
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.0
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 138 YRKSFYCSRCTRGLSFRWPIKH*L*AHGTRNRCSEPRKWLSAASSCKHRHFSWH*NRNRY 317
Y + CSR R +R + H + + E R S + R + N N Y
Sbjct: 220 YSRERSCSR-DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSY 278
Query: 318 TKARQT 335
K R+T
Sbjct: 279 RKYRET 284
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.0
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 138 YRKSFYCSRCTRGLSFRWPIKH*L*AHGTRNRCSEPRKWLSAASSCKHRHFSWH*NRNRY 317
Y + CSR R +R + H + + E R S + R + N N Y
Sbjct: 231 YSRERSCSR-DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSY 289
Query: 318 TKARQT 335
K R+T
Sbjct: 290 RKYRET 295
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.0
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 138 YRKSFYCSRCTRGLSFRWPIKH*L*AHGTRNRCSEPRKWLSAASSCKHRHFSWH*NRNRY 317
Y + CSR R +R + H + + E R S + R + N N Y
Sbjct: 231 YSRERSCSR-DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSY 289
Query: 318 TKARQT 335
K R+T
Sbjct: 290 RKYRET 295
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.0
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 138 YRKSFYCSRCTRGLSFRWPIKH*L*AHGTRNRCSEPRKWLSAASSCKHRHFSWH*NRNRY 317
Y + CSR R +R + H + + E R S + R + N N Y
Sbjct: 220 YSRERSCSR-DRNREYRKKDRQYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSY 278
Query: 318 TKARQT 335
K R+T
Sbjct: 279 RKYRET 284
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 6.0
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 138 YRKSFYCSRCTRGLSFRWPIKH*L*AHGTRNRCSEPRKWLSAASSCKHRHFSWH*NRNRY 317
Y + CSR R +R + H + + E R S + R + N N Y
Sbjct: 231 YSRERSCSR-DRNREYRKKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSY 289
Query: 318 TKARQT 335
K R+T
Sbjct: 290 RKYRET 295
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 6.0
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 138 YRKSFYCSRCTRGLSFRWPIKH*L*AHGTRNRCSEPRKWLSAASSCKHRHFSWH*NRNRY 317
Y + CSR R +R + H + + E R S + R + N N Y
Sbjct: 236 YSRERSCSR-DRNREYRKKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNENSY 294
Query: 318 TKARQT 335
K R+T
Sbjct: 295 RKYRET 300
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 6.0
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 138 YRKSFYCSRCTRGLSFRWPIKH*L*AHGTRNRCSEPRKWLSAASSCKHRHFSWH*NRNRY 317
Y + CSR R +R + H + + E R S + R + N N Y
Sbjct: 231 YSRERSCSR-DRNREYREKDRRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSY 289
Query: 318 TKARQT 335
K R+T
Sbjct: 290 RKYRET 295
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,314
Number of Sequences: 438
Number of extensions: 3849
Number of successful extensions: 36
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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