Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_G12
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 144 1e-34
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 144 1e-34
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 144 1e-34
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 144 1e-34
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 144 1e-34
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 144 1e-34
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 135 6e-32
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 67 3e-11
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 144 bits (349), Expect = 1e-34
Identities = 64/88 (72%), Positives = 77/88 (87%)
Frame = +3
Query: 102 VGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVRVRLSRXRNDD 281
VGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+R+RVRLSR RN+D
Sbjct: 32 VGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED 91
Query: 282 EXSAHKLFTLXTYVPVASIKGLXTENVD 365
E S +KL+TL TYVPV + K L T NVD
Sbjct: 92 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Frame = +2
Query: 11 KPKGEXK-GKSAINEVVTREYTVNLHKRLHGCWI*KACPKS 130
K GE K G+SAINEVVTREYT+N+HKR+HG K P++
Sbjct: 1 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRA 41
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 144 bits (349), Expect = 1e-34
Identities = 64/88 (72%), Positives = 77/88 (87%)
Frame = +3
Query: 102 VGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVRVRLSRXRNDD 281
VGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+R+RVRLSR RN+D
Sbjct: 36 VGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED 95
Query: 282 EXSAHKLFTLXTYVPVASIKGLXTENVD 365
E S +KL+TL TYVPV + K L T NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 55.6 bits (128), Expect = 8e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 8 AKPKGEXK-GKSAINEVVTREYTVNLHKRLHGCWI*KACPKS 130
AK GE K G+SAINEVVTREYT+N+HKR+HG K P++
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRA 45
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 144 bits (349), Expect = 1e-34
Identities = 64/88 (72%), Positives = 77/88 (87%)
Frame = +3
Query: 102 VGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVRVRLSRXRNDD 281
VGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+R+RVRLSR RN+D
Sbjct: 36 VGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED 95
Query: 282 EXSAHKLFTLXTYVPVASIKGLXTENVD 365
E S +KL+TL TYVPV + K L T NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 55.6 bits (128), Expect = 8e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 8 AKPKGEXK-GKSAINEVVTREYTVNLHKRLHGCWI*KACPKS 130
AK GE K G+SAINEVVTREYT+N+HKR+HG K P++
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRA 45
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 144 bits (349), Expect = 1e-34
Identities = 64/88 (72%), Positives = 77/88 (87%)
Frame = +3
Query: 102 VGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVRVRLSRXRNDD 281
VGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+R+RVRLSR RN+D
Sbjct: 36 VGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED 95
Query: 282 EXSAHKLFTLXTYVPVASIKGLXTENVD 365
E S +KL+TL TYVPV + K L T NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 55.6 bits (128), Expect = 8e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 8 AKPKGEXK-GKSAINEVVTREYTVNLHKRLHGCWI*KACPKS 130
AK GE K G+SAINEVVTREYT+N+HKR+HG K P++
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRA 45
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 144 bits (349), Expect = 1e-34
Identities = 64/88 (72%), Positives = 77/88 (87%)
Frame = +3
Query: 102 VGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVRVRLSRXRNDD 281
VGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+R+RVRLSR RN+D
Sbjct: 36 VGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED 95
Query: 282 EXSAHKLFTLXTYVPVASIKGLXTENVD 365
E S +KL+TL TYVPV + K L T NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 55.6 bits (128), Expect = 8e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 8 AKPKGEXK-GKSAINEVVTREYTVNLHKRLHGCWI*KACPKS 130
AK GE K G+SAINEVVTREYT+N+HKR+HG K P++
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRA 45
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 144 bits (349), Expect = 1e-34
Identities = 64/88 (72%), Positives = 77/88 (87%)
Frame = +3
Query: 102 VGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVRVRLSRXRNDD 281
VGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+R+RVRLSR RN+D
Sbjct: 36 VGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED 95
Query: 282 EXSAHKLFTLXTYVPVASIKGLXTENVD 365
E S +KL+TL TYVPV + K L T NVD
Sbjct: 96 EDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
Score = 55.6 bits (128), Expect = 8e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 8 AKPKGEXK-GKSAINEVVTREYTVNLHKRLHGCWI*KACPKS 130
AK GE K G+SAINEVVTREYT+N+HKR+HG K P++
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRA 45
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 135 bits (327), Expect = 6e-32
Identities = 59/80 (73%), Positives = 72/80 (90%)
Frame = +3
Query: 102 VGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVRVRLSRXRNDD 281
VGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP+R+RVRLSR RN+D
Sbjct: 36 VGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED 95
Query: 282 EXSAHKLFTLXTYVPVASIK 341
E S +KL+TL TYVPV + K
Sbjct: 96 EDSPNKLYTLVTYVPVTTFK 115
Score = 55.6 bits (128), Expect = 8e-08
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +2
Query: 8 AKPKGEXK-GKSAINEVVTREYTVNLHKRLHGCWI*KACPKS 130
AK GE K G+SAINEVVTREYT+N+HKR+HG K P++
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRA 45
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 66.9 bits (156), Expect = 3e-11
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3
Query: 231 NVPFRVRVRLSRXRNDDEXSAHKLFTLXTYVPVASIKGLXTENVD 365
NVP+R+RVRLSR RN+DE S +KL+TL TYVPV + K L T NVD
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,523,474
Number of Sequences: 237096
Number of extensions: 851962
Number of successful extensions: 1224
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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