Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_G05
         (360 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.27 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   2.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   5.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   5.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   5.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   7.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   7.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   7.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.27
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 87  QRXIV-RTPGGRLVYQYVKKPKKI 155
           QR I+ +  G RLVYQ+V  PK I
Sbjct: 523 QRGILAKVDGQRLVYQFVDVPKDI 546


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 143 LFDILINQAATRCPY 99
           LFD+  N++  +CPY
Sbjct: 550 LFDLDYNESEEQCPY 564


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 170 LTTPWDLLGLFDILI 126
           +TTPWD   ++  L+
Sbjct: 168 ITTPWDYYYIYHTLV 182


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 170 LTTPWDLLGLFDILI 126
           +TTPWD   ++  L+
Sbjct: 183 ITTPWDYYYIYHTLV 197


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 170 LTTPWDLLGLFDILI 126
           +TTPWD   ++  L+
Sbjct: 71  ITTPWDYYYIYHTLV 85


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = +2

Query: 221 PSLLP*ENSETCLWWC 268
           P ++  +  +TC W C
Sbjct: 455 PGMIKKQQGDTCCWVC 470


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 135 HTDKPSGHP 109
           HT  P+GHP
Sbjct: 124 HTPTPNGHP 132


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = +2

Query: 221 PSLLP*ENSETCLWWC 268
           P ++  +  +TC W C
Sbjct: 545 PGMIKKQQGDTCCWVC 560


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,283
Number of Sequences: 438
Number of extensions: 1747
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)