Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_G04
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.23 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   2.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   3.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.8  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 159 MTRHLKALIGPSILNADLSQLYEESQKLLDNGADYL 266
           MTR+L    G  +  + ++ L  E  K LDNG  +L
Sbjct: 591 MTRYLGDFEGNQVEGSPVTSLNREEIKRLDNGVGFL 626


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 428 SIHISYRTCQRCNXSVQKSXRARNEXRSCNK 520
           S+H S R  ++ N    K    RN   SC K
Sbjct: 172 SLHPSPRITKKANSVSVKVENRRNSPNSCEK 202


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 428 SIHISYRTCQRCNXSVQKSXRARNEXRSCNK 520
           S+H S R  ++ N    K    RN   SC K
Sbjct: 120 SLHPSPRITKKANSVSVKVENRRNSPNSCEK 150


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 428 SIHISYRTCQRCNXSVQKSXRARNEXRSCNK 520
           S+H S R  ++ N    K    RN   SC K
Sbjct: 303 SLHPSPRITKKANSVSVKVENRRNSPNSCEK 333


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/32 (21%), Positives = 19/32 (59%)
 Frame = +3

Query: 390 EQWITPMADAGVNQYTFHIEPVKDVIXVCRKV 485
           + W    ++ G+N++ F ++ ++D+    RK+
Sbjct: 52  DPWFAGSSNVGINKWRFLLQCLEDLDRSLRKL 83


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/40 (20%), Positives = 16/40 (40%)
 Frame = -2

Query: 524 RLYCNSYXHSVLXNFSAHXYYIFDRFYMKCVLIDSSISHW 405
           RL+   + H +L  F      +    +  CV++    + W
Sbjct: 866 RLFNEIFGHGLLLMFGISFLLVTQTIFALCVVLQLQENDW 905


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,603
Number of Sequences: 336
Number of extensions: 2593
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)