Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_G04
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072401-1|AAH72401.1| 228|Homo sapiens ribulose-5-phosphate-3-... 189 6e-48
BC016764-1|AAH16764.1| 228|Homo sapiens ribulose-5-phosphate-3-... 189 6e-48
BC005148-1|AAH05148.2| 228|Homo sapiens ribulose-5-phosphate-3-... 189 6e-48
DQ120706-1|ABC40667.1| 228|Homo sapiens rcRPE protein. 181 2e-45
AJ224326-1|CAA11895.1| 174|Homo sapiens ribulose-5-phosphate-ep... 111 2e-24
AK093658-1|BAC04212.1| 178|Homo sapiens protein ( Homo sapiens ... 86 1e-16
AK056028-1|BAB71076.1| 178|Homo sapiens protein ( Homo sapiens ... 86 1e-16
AC007038-1|AAX93087.1| 178|Homo sapiens unknown protein. 86 1e-16
>BC072401-1|AAH72401.1| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 189 bits (461), Expect = 6e-48
Identities = 88/153 (57%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Frame = +3
Query: 183 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAF 359
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D F
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
Query: 360 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGMXVGVAIKPGTPVS 539
F+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + + E+GM VG+AIKPGT V
Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVE 126
Query: 540 EVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
+ + + M L+MTVEPGFGG K PK
Sbjct: 127 YLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 159
>BC016764-1|AAH16764.1| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 189 bits (461), Expect = 6e-48
Identities = 88/153 (57%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Frame = +3
Query: 183 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAF 359
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D F
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
Query: 360 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGMXVGVAIKPGTPVS 539
F+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + + E+GM VG+AIKPGT V
Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVE 126
Query: 540 EVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
+ + + M L+MTVEPGFGG K PK
Sbjct: 127 YLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 159
>BC005148-1|AAH05148.2| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 189 bits (461), Expect = 6e-48
Identities = 88/153 (57%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Frame = +3
Query: 183 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAF 359
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D F
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
Query: 360 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGMXVGVAIKPGTPVS 539
F+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + + E+GM VG+AIKPGT V
Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVE 126
Query: 540 EVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
+ + + M L+MTVEPGFGG K PK
Sbjct: 127 YLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 159
>DQ120706-1|ABC40667.1| 228|Homo sapiens rcRPE protein.
Length = 228
Score = 181 bits (440), Expect = 2e-45
Identities = 85/153 (55%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Frame = +3
Query: 183 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAF 359
IGPSILN+DL+ L + ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D F
Sbjct: 7 IGPSILNSDLANLGAKCLQMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
Query: 360 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGMXVGVAIKPGTPVS 539
F+ HMMV KPEQW+ PMA A NQYTFH+E ++ + + + E+GM VG+AIKPGT V
Sbjct: 67 FDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIKPGTSVE 126
Query: 540 EVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
+ + + M L+MTVEPGFG K PK
Sbjct: 127 YLAPWANQIDMALVMTVEPGFGEQKFMEDMMPK 159
>AJ224326-1|CAA11895.1| 174|Homo sapiens
ribulose-5-phosphate-epimerase protein.
Length = 174
Score = 111 bits (267), Expect = 2e-24
Identities = 50/97 (51%), Positives = 65/97 (67%)
Frame = +3
Query: 348 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGMXVGVAIKPG 527
+D FF+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + + E+GM VG+AIKPG
Sbjct: 9 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 68
Query: 528 TPVSEVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
T V + + + M L+MTVEPGFGG K PK
Sbjct: 69 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 105
>AK093658-1|BAC04212.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ36339 fis, clone THYMU2006365, highly similar to
Homo sapiens mRNA for putative
ribulose-5-phosphate-epimerase. ).
Length = 178
Score = 85.8 bits (203), Expect = 1e-16
Identities = 47/108 (43%), Positives = 60/108 (55%), Gaps = 18/108 (16%)
Frame = +3
Query: 369 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGM---------------- 500
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + + E+GM
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 501 --XVGVAIKPGTPVSEVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
VG+AIKPGT V + + + M L+MTVEPGFGG K PK
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 109
>AK056028-1|BAB71076.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ31466 fis, clone NT2NE2001372, highly similar to
Homo sapiens mRNA for putative
ribulose-5-phosphate-epimerase. ).
Length = 178
Score = 85.8 bits (203), Expect = 1e-16
Identities = 47/108 (43%), Positives = 60/108 (55%), Gaps = 18/108 (16%)
Frame = +3
Query: 369 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGM---------------- 500
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + + E+GM
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 501 --XVGVAIKPGTPVSEVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
VG+AIKPGT V + + + M L+MTVEPGFGG K PK
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 109
>AC007038-1|AAX93087.1| 178|Homo sapiens unknown protein.
Length = 178
Score = 85.8 bits (203), Expect = 1e-16
Identities = 47/108 (43%), Positives = 60/108 (55%), Gaps = 18/108 (16%)
Frame = +3
Query: 369 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGM---------------- 500
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + + E+GM
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 501 --XVGVAIKPGTPVSEVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
VG+AIKPGT V + + + M L+MTVEPGFGG K PK
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPK 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,457,064
Number of Sequences: 237096
Number of extensions: 1450012
Number of successful extensions: 2538
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2534
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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