Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_G04
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061110-1|AAL28658.1|  221|Drosophila melanogaster LD09559p pro...   245   5e-65
AE013599-451|AAM71098.1|  221|Drosophila melanogaster CG30499-PA...   245   5e-65
BT003492-1|AAO39495.1|  766|Drosophila melanogaster RE55430p pro...    36   0.048
AE014297-2928|AAF55848.1|  766|Drosophila melanogaster CG7034-PA...    36   0.048

>AY061110-1|AAL28658.1|  221|Drosophila melanogaster LD09559p
           protein.
          Length = 221

 Score =  245 bits (599), Expect = 5e-65
 Identities = 114/156 (73%), Positives = 129/156 (82%)
 Frame = +3

Query: 171 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKIK 350
           ++A IGPSILNADLS L  ESQKLLDNGADYLHLDVMDG FVPNLTFGHP+VK LR KIK
Sbjct: 3   VQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNKIK 62

Query: 351 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGMXVGVAIKPGT 530
            AFFETHMMV+ PEQWI PMADAGVN YTFH+EPV+DV+ V R+V E GM VG+AIKPGT
Sbjct: 63  TAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKVGLAIKPGT 122

Query: 531 PVSEVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
            V ++EKY+SI+ +VL+MTVEPGFGG        PK
Sbjct: 123 EVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPK 158


>AE013599-451|AAM71098.1|  221|Drosophila melanogaster CG30499-PA
           protein.
          Length = 221

 Score =  245 bits (599), Expect = 5e-65
 Identities = 114/156 (73%), Positives = 129/156 (82%)
 Frame = +3

Query: 171 LKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKIK 350
           ++A IGPSILNADLS L  ESQKLLDNGADYLHLDVMDG FVPNLTFGHP+VK LR KIK
Sbjct: 3   VQAKIGPSILNADLSNLAAESQKLLDNGADYLHLDVMDGTFVPNLTFGHPMVKSLRNKIK 62

Query: 351 DAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXEHGMXVGVAIKPGT 530
            AFFETHMMV+ PEQWI PMADAGVN YTFH+EPV+DV+ V R+V E GM VG+AIKPGT
Sbjct: 63  TAFFETHMMVQNPEQWIEPMADAGVNLYTFHVEPVQDVVRVSRRVQESGMKVGLAIKPGT 122

Query: 531 PVSEVEKYISISXMVLIMTVEPGFGGXKLWRIKWPK 638
            V ++EKY+SI+ +VL+MTVEPGFGG        PK
Sbjct: 123 EVQDLEKYLSIADVVLVMTVEPGFGGQSFMADMMPK 158


>BT003492-1|AAO39495.1|  766|Drosophila melanogaster RE55430p
           protein.
          Length = 766

 Score = 35.9 bits (79), Expect = 0.048
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
 Frame = +3

Query: 213 SQLYEESQKLLDNGA-DYLHLDVMDGQFVPNLTFGHPVVKCLRGKIKDAFFETHMMVEKP 389
           S +Y+E  K +  GA   ++LD+M  +F        PV     G++   F     +++  
Sbjct: 640 SIMYDEDVKQISTGALTQINLDLMQCEF---FAASEPVPGLKEGELSKYFLRNRQLLDLL 696

Query: 390 --EQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXE 491
             E+W T   D G  +  +H+   + +I +  K+ E
Sbjct: 697 ILEEWSTYFHDYGKQENRYHLVQPQSIIVILEKIRE 732


>AE014297-2928|AAF55848.1|  766|Drosophila melanogaster CG7034-PA
           protein.
          Length = 766

 Score = 35.9 bits (79), Expect = 0.048
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
 Frame = +3

Query: 213 SQLYEESQKLLDNGA-DYLHLDVMDGQFVPNLTFGHPVVKCLRGKIKDAFFETHMMVEKP 389
           S +Y+E  K +  GA   ++LD+M  +F        PV     G++   F     +++  
Sbjct: 640 SIMYDEDVKQISTGALTQINLDLMQCEF---FAASEPVPGLKEGELSKYFLRNRQLLDLL 696

Query: 390 --EQWITPMADAGVNQYTFHIEPVKDVIXVCRKVXE 491
             E+W T   D G  +  +H+   + +I +  K+ E
Sbjct: 697 ILEEWSTYFHDYGKQENRYHLVQPQSIIVILEKIRE 732


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,389,345
Number of Sequences: 53049
Number of extensions: 413713
Number of successful extensions: 764
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)