Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_G03
(370 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29 pro... 53 3e-07
U49083-1|AAC50647.1| 159|Homo sapiens HIP protein. 53 3e-07
U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29 pro... 53 3e-07
BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29 p... 53 3e-07
BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29 p... 53 3e-07
BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29 p... 53 3e-07
BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29 p... 53 3e-07
BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29 p... 53 3e-07
AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA seq... 53 3e-07
BC045542-1|AAH45542.1| 702|Homo sapiens KIF3A protein protein. 31 1.2
AM177178-1|CAJ45482.1| 725|Homo sapiens kinesin-like protein KI... 31 1.2
AF041853-1|AAC72294.1| 702|Homo sapiens kinesin family member p... 31 1.2
AB209780-1|BAD93017.1| 730|Homo sapiens Kinesin-like protein KI... 31 1.2
>Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRQDQ 132
MAKSKNHT HNQ+RK HRNGIKKPR +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
>U49083-1|AAC50647.1| 159|Homo sapiens HIP protein.
Length = 159
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRQDQ 132
MAKSKNHT HNQ+RK HRNGIKKPR +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
>U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRQDQ 132
MAKSKNHT HNQ+RK HRNGIKKPR +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
>BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29
protein.
Length = 161
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRQDQ 132
MAKSKNHT HNQ+RK HRNGIKKPR +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
>BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRQDQ 132
MAKSKNHT HNQ+RK HRNGIKKPR +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
>BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRQDQ 132
MAKSKNHT HNQ+RK HRNGIKKPR +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
>BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRQDQ 132
MAKSKNHT HNQ+RK HRNGIKKPR +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
>BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRQDQ 132
MAKSKNHT HNQ+RK HRNGIKKPR +
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 28
>AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA
sequence from clone RP11-632C17 on chromosome 6 Contains
the gene for a novel protein similar to ribosomal
protein L29 ).
Length = 172
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRQDQ 132
MAKSKNHT HNQ+RK HRNGIKKPR +
Sbjct: 16 MAKSKNHTTHNQSRKWHRNGIKKPRSQR 43
>BC045542-1|AAH45542.1| 702|Homo sapiens KIF3A protein protein.
Length = 702
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +2
Query: 29 WIENSSKWQSQRIIQIITKTAKLTEMVSKSQGKTRHESTLAHGSKIFKESKVLQRRVT*S 208
W E+ +WQ + + K T + K + K E L+H + E + Q +
Sbjct: 613 WNEDIGEWQLKCVAYTGNNMRKQTPVPDKKE-KDPFEVDLSHVYLAYTEESLRQSLMKLE 671
Query: 209 QPSNSRGRLREKLPEKQR 262
+P S+G+ R K ++R
Sbjct: 672 RPRTSKGKARPKTGRRKR 689
>AM177178-1|CAJ45482.1| 725|Homo sapiens kinesin-like protein
KIF3Abeta protein.
Length = 725
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +2
Query: 29 WIENSSKWQSQRIIQIITKTAKLTEMVSKSQGKTRHESTLAHGSKIFKESKVLQRRVT*S 208
W E+ +WQ + + K T + K + K E L+H + E + Q +
Sbjct: 636 WNEDIGEWQLKCVAYTGNNMRKQTPVPDKKE-KDPFEVDLSHVYLAYTEESLRQSLMKLE 694
Query: 209 QPSNSRGRLREKLPEKQR 262
+P S+G+ R K ++R
Sbjct: 695 RPRTSKGKARPKTGRRKR 712
>AF041853-1|AAC72294.1| 702|Homo sapiens kinesin family member
protein KIF3A protein.
Length = 702
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +2
Query: 29 WIENSSKWQSQRIIQIITKTAKLTEMVSKSQGKTRHESTLAHGSKIFKESKVLQRRVT*S 208
W E+ +WQ + + K T + K + K E L+H + E + Q +
Sbjct: 613 WNEDIGEWQLKCVAYTGNNMRKQTPVPDKKE-KDPFEVDLSHVYLAYTEESLRQSLMKLE 671
Query: 209 QPSNSRGRLREKLPEKQR 262
+P S+G+ R K ++R
Sbjct: 672 RPRTSKGKARPKTGRRKR 689
>AB209780-1|BAD93017.1| 730|Homo sapiens Kinesin-like protein KIF3A
variant protein.
Length = 730
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = +2
Query: 29 WIENSSKWQSQRIIQIITKTAKLTEMVSKSQGKTRHESTLAHGSKIFKESKVLQRRVT*S 208
W E+ +WQ + + K T + K + K E L+H + E + Q +
Sbjct: 641 WNEDIGEWQLKCVAYTGNNMRKQTPVPDKKE-KDPFEVDLSHVYLAYTEESLRQSLMKLE 699
Query: 209 QPSNSRGRLREKLPEKQR 262
+P S+G+ R K ++R
Sbjct: 700 RPRTSKGKARPKTGRRKR 717
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,107,551
Number of Sequences: 237096
Number of extensions: 802861
Number of successful extensions: 1711
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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