Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_G02
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione ...    60   2e-09
Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical pr...    54   9e-08
AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical ...    54   1e-07
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl...    28   5.0  
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ...    28   5.0  

>AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione
           s-transferase protein43 protein.
          Length = 214

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = +2

Query: 254 SRVILHAHWLSSCSWRVRAMLHAKSIPFEXRPVDIVKTGKQLTEEYRAINPAQKVPALEI 433
           ++ IL+++W SSC+WRVR  L  K+I +E RP+D+     +   E+   NPA+KVP L I
Sbjct: 2   AKPILYSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTLVI 61


>Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical
           protein D1053.1 protein.
          Length = 214

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 23/63 (36%), Positives = 39/63 (61%)
 Frame = +2

Query: 245 MVESRVILHAHWLSSCSWRVRAMLHAKSIPFEXRPVDIVKTGKQLTEEYRAINPAQKVPA 424
           M   + +L+++W SSCSWRVR  L  K++ +E + VD++   ++   + + INPA KVP 
Sbjct: 1   MSNQKPVLYSYWRSSCSWRVRIALALKNVDYEYKTVDLL--SEEAKSKLKEINPAAKVPT 58

Query: 425 LEI 433
             +
Sbjct: 59  FVV 61


>AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical
           protein Y53G8B.1 protein.
          Length = 213

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = +2

Query: 254 SRVILHAHWLSSCSWRVRAMLHAKSIPFEXRPVDIVKTGKQLTEEYRAINPAQKVPALEI 433
           ++ IL++ W S CS RVR  L  K I +E +PV+++   KQ  +E+   NPA+KVP L+I
Sbjct: 3   AKPILYSSWSSGCSSRVRTALALKKIDYEYQPVNLL--NKQKEQEFHGNNPAEKVPILKI 60


>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
           protein 23 protein.
          Length = 1043

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = -1

Query: 374 VYQFLQYPPG--VXRKVCFLHVALLEHATNTKTANG 273
           VY     PP     RKVC L   +L +   TKT NG
Sbjct: 354 VYAAFYVPPNSDTVRKVCELEPVMLTNCDGTKTGNG 389


>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
           guanyly cyclase protein.
          Length = 1073

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = -1

Query: 374 VYQFLQYPPG--VXRKVCFLHVALLEHATNTKTANG 273
           VY     PP     RKVC L   +L +   TKT NG
Sbjct: 384 VYAAFYVPPNSDTVRKVCELEPVMLTNCDGTKTGNG 419


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,898,540
Number of Sequences: 27780
Number of extensions: 217340
Number of successful extensions: 446
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)