Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_F23
(560 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 122 2e-30
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 122 2e-30
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 110 7e-27
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 108 4e-26
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.4
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 5.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 5.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 5.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 5.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 5.5
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 21 7.2
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 122 bits (294), Expect = 2e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 2 QIFVKTLTGK 11
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 122 bits (294), Expect = 2e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 122 bits (294), Expect = 2e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 87 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 122 bits (294), Expect = 2e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 163 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 122 bits (294), Expect = 2e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 122 bits (294), Expect = 2e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 315 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 122 bits (294), Expect = 2e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 467 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 122 bits (294), Expect = 2e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 543 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 122 bits (294), Expect = 2e-30
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 619 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 120 bits (288), Expect = 1e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 391 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 2 QIFVKTLTGK 11
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 78 QIFVKTLTGK 87
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 154 QIFVKTLTGK 163
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 230 QIFVKTLTGK 239
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 306 QIFVKTLTGK 315
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 382 QIFVKTLTGK 391
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 458 QIFVKTLTGK 467
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 534 QIFVKTLTGK 543
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 610 QIFVKTLTGK 619
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 110 bits (265), Expect = 7e-27
Identities = 52/54 (96%), Positives = 54/54 (100%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 192
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 2 QIFVKTLTGK 11
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 108 bits (259), Expect = 4e-26
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +1
Query: 31 RTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 192
+TITLEVEPSDTIENVKAKIQDKEGIPP+QQR IFAGKQLEDGRTLSDYNIQKE
Sbjct: 59 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112
Score = 88.6 bits (210), Expect = 3e-20
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +1
Query: 85 KIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 210
KIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 42
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 3 QIFVKXLTGK 32
QIFVK LTGK
Sbjct: 50 QIFVKTLTGK 59
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 484 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 398
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -2
Query: 226 HHEASTPGGGWIPSGYCSPR 167
HH P GG P G PR
Sbjct: 63 HHYGGPPSGGQPPQGMPYPR 82
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.4 bits (43), Expect = 5.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 198 GGFLLDIVVREGTSIFQLLSS 136
GGFLL VV+ G ++ LSS
Sbjct: 108 GGFLLCKVVKYGQTLGPYLSS 128
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 270 DQAQEEEGQTSRPQVLQGSTRTVRST 347
D ++E + GSTRTV+ T
Sbjct: 14 DNFSDDESSPLTENIYGGSTRTVQET 39
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 270 DQAQEEEGQTSRPQVLQGSTRTVRST 347
D ++E + GSTRTV+ T
Sbjct: 14 DNFSDDESSPLTENIYGGSTRTVQET 39
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 270 DQAQEEEGQTSRPQVLQGSTRTVRST 347
D ++E + GSTRTV+ T
Sbjct: 14 DNFSDDESSPLTENIYGGSTRTVQET 39
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 270 DQAQEEEGQTSRPQVLQGSTRTVRST 347
D ++E + GSTRTV+ T
Sbjct: 14 DNFSDDESSPLTENIYGGSTRTVQET 39
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 11 RKXPHGQEPSPLR 49
RK PH EP P R
Sbjct: 20 RKRPHSPEPYPPR 32
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,271
Number of Sequences: 336
Number of extensions: 2447
Number of successful extensions: 37
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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